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scnpilot_p_inoc_scaffold_20_59

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 85500..88694

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9RQ41_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 999.99
  • Bit_score: 828
  • Evalue 6.70e-237
TonB-dependent receptor {ECO:0000313|EMBL:GAO30835.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548. similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 999.99
  • Bit_score: 981
  • Evalue 1.10e-282
outer membrane cobalamin receptor protein similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 999.99
  • Bit_score: 747
  • Evalue 5.50e-213

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3195
ATGGATGATAGAAAGAATATGAAAAAGCAAACAACACATAAACAGAATAGTATGAACAATTCAATATTCAACATATTCGGGATGAAGTCCATTTTTACGGTGTTACTCCTTCTGCTTACCATTGGAATGGTTGCTCAGGACAAGGGAATGTTCAAAGGGAAGATCACTGATGCGGCTACCGGTCAGCCGATTAGTGCGGCACAGGTTTCTATCCCCGATAAAAACGCCTCGGCGGTAACCAACGAAAACGGAGAATTTGAAGTGAAAATAACATCGGCAAACGACATCATGCAGGTATCGGCCATTGGGTACGATGTGCGCGAAATCGGGATGCAGGGACGCCGGTCGGCTGAGATCCGGTTGTATCGTAAAGGTTTCACCCCGTATTTCAAACAAGTTCAGGATCTGAACGGTGCTGTGAATCAGAGTGCCGCTACCGCGTCGATCCATGGTATTGCTACCAACGACTTATCGTCGGCTCTGGTAGCCGATGAAATTATCATGCGCCAGATCGGAGCTACGGCCCGTCAGGTGATTCGTTCGGGTGCCGAAGGCATGGGAACCAACCTGTTTATTCGCGGTATGAATTCGCTCAATGCCAATGCTCAACCTTTGTACATTGTGGATGGAGTGATCTGGGATAATATGCAGAATGTAGCGTCCATTCACGGGGGGCATTTTTCGAACCCGCTGGATAATATTCCGGTCGAGGATATTGCCAATATCACCGTGTTGAAAGACGGTACTTCGATTTATGGAAGCAAGGCAGCCAACGGGGTGGTAGTAATCAATACCAAACGTGCGGCCAATATGGTAACTCGTATCGACCTGAAGATGTTTCTGTCGACCACACAGTCGCCGGCAGGAGTGCCCATGATGAATGGCGACGATTTCCGCATTTACGCCAGCGACATGCTGGGCTCGACCGGCGTATCGCCAAAACTGGTCGATAATGTAGGTTTCCTGATCACCGATCCTTCGAATACGCAATATCCGGTGTATCACAATTCGACCGATTGGAGAAAACTGGTCTATCAGCCGGGATTTACCCAGAATTATCAGATTAATGTGACGGGGGGCGACGAAAAAGCCTTGTATTATTTCTCCATCGGTCTGGCCGATAACAAGGGGATTGTAAAAACAACCGACTGGAACCGCATCAATTCGCGCTTTAATGCCGATTTCAACTTGGGTGATCATCTTAATTTAGGATTGAATATCGGTTTTACTCGTAACGAGCGCTCGCTCATCGACGATGGTGTGAACCGCTACTCATCGCCCACCTGGCAAGCGGTTATCAAATCGCCTTTCCTGAGTCAGTATTCGTTTACCAACCAGGGCGAAATAACCGCCAATCCGGCTGTGACCGACATCTTCGATATTGGTAACCCTACGGCTGTAATCCGTTACTCGCAGAATTTTCAGAAAAAATACCGGTTCAACATCTCGGTAGTGCCGGAGTGGAAAATAACCCCCGATCTGAAATTAACCTCGCTGTTCGACTACAGCTTGTACAAAACCATCGAAGGGCATTTTGTTCCCGAAAAATTCACCCCGCTCCGGTACCTCGAAAACAAAGGTTATTCGAAAAACATGATTTCGAGTCAGGTAATGCGTAATACCAATATCTACAGCAATACTTATCTGACCTATACCAAGGCGTTCGATCTGCAACACCGTCTGAAGGCCCTGGCCGGGGTACGGTATATTTTCAATTACCTCGAGTCGGATTATGCCGAAGAGCACAATTCGGGTTCGAACAATAACACCACCATCACCGGTGCCTACGACTTTCTGTATGTCGACGGTTTGAATGTGGAAACCAAGTCGATTTCGAATTATTATCAGGCCGAATATGCCTACGATCAGCGCTATTTCCTCGGTGCATCGGTGTCGTTCGATGCTTCGTCGCGTTTCGGACGCAATACGGCCGGCGGTATTAACGGAGTGGGTGTTTTCCCTGCTATCAACGGAGCCTGGCTGGTGTCGTCGGAAAGTTTCATGAGTAATGTCGCTCCGGTGAATTTCCTGAAGTTGCGGGTGGGTTATGCGTTGTCGGGTAACGACGATATACGCGACTACGAATCGCAGACCTATTTCAATTCGGTACGGTTTATCAACCGGGCCAACGGGCTGGTACTTGCCAATCTGGCCAATACCCGCGTTCAGTGGGAATCCACGGCCCGTGCCAATGCGGGGCTCGATCTGGGGCTGTTCAACGACCGCCTGAATATCCAGGCCGATGTTTTCCATAGTACTACATCCGACCTGCTTACACTTCAACCGCTGCCCGAAATTACCGGTCTGGGATATTACTGGGCCAACGGCGGATCGATGACCAACACGGGCTGGGAAGCTGCTGCTCAGGTAAAGCTGGTCAATACCGGCAATTTCCAATGGGAAGTAGGACTCAGTGCAGGTAGTTATGTGAACGAAGTCAAGAGTCTGCCCGACGATAAACCGATTGTGACCGCTCGTTACGGAGGTGAGCTGATTACCGAAGTAGGCAGCCCGTATGCATCGTTCTACGGCTATAAAACCAACGGAGTATTTGCTTCGCAGGCCGATGCCGATGCTGCCGGATTAAAAAAGCTGATGCCCGATGGATCGTATTCGCAATTCGGTGCCGGCGATATGATTTTCGAAGAGGTGGTGAAAGATGGTATCATCGACGAAAAAGACCGCCAGGTAATTGGAAGTCCGATACCTACCCTGTATGGGAATTTCAACACCCGCTTCAACTACAAACGATTTACACTGGATGCAGTGTTCTCGTACAGCTACGGCAATGAAGTGTACAACTACTACCGTCGTAACCTGGAGTCGGGATCCGACTATAGCAATCAGACACTGGCCATGTTGCGCCGCTGGACGGGCGAAGGGCAGACGACTGTCGTGCCGCGGGCAGTGTACGGCGACCCCATGGGCAATGCCCGGTTCTCCGATCGCTGGATCGAGAACGGTTCGTTCCTGCGCTTCAAGAACCTTACGTTCTCCTATCGTTTACCGCTCAGCAGCGAGTTCATCGAAGGGTTAAGCGTATGGGCTTCGGCCGACAACCTCTACACCTGGACCTCGTACCTGGGCATCGATCCCGAGGTTGCGGCAGGTAATTCGGTGTTCGATCAGGGTATCGACAATGGTTTATTGCCTCCGACCCGTTCGTTCTCGCTGGGTGTTAAGATCAATCTGTAA
PROTEIN sequence
Length: 1065
MDDRKNMKKQTTHKQNSMNNSIFNIFGMKSIFTVLLLLLTIGMVAQDKGMFKGKITDAATGQPISAAQVSIPDKNASAVTNENGEFEVKITSANDIMQVSAIGYDVREIGMQGRRSAEIRLYRKGFTPYFKQVQDLNGAVNQSAATASIHGIATNDLSSALVADEIIMRQIGATARQVIRSGAEGMGTNLFIRGMNSLNANAQPLYIVDGVIWDNMQNVASIHGGHFSNPLDNIPVEDIANITVLKDGTSIYGSKAANGVVVINTKRAANMVTRIDLKMFLSTTQSPAGVPMMNGDDFRIYASDMLGSTGVSPKLVDNVGFLITDPSNTQYPVYHNSTDWRKLVYQPGFTQNYQINVTGGDEKALYYFSIGLADNKGIVKTTDWNRINSRFNADFNLGDHLNLGLNIGFTRNERSLIDDGVNRYSSPTWQAVIKSPFLSQYSFTNQGEITANPAVTDIFDIGNPTAVIRYSQNFQKKYRFNISVVPEWKITPDLKLTSLFDYSLYKTIEGHFVPEKFTPLRYLENKGYSKNMISSQVMRNTNIYSNTYLTYTKAFDLQHRLKALAGVRYIFNYLESDYAEEHNSGSNNNTTITGAYDFLYVDGLNVETKSISNYYQAEYAYDQRYFLGASVSFDASSRFGRNTAGGINGVGVFPAINGAWLVSSESFMSNVAPVNFLKLRVGYALSGNDDIRDYESQTYFNSVRFINRANGLVLANLANTRVQWESTARANAGLDLGLFNDRLNIQADVFHSTTSDLLTLQPLPEITGLGYYWANGGSMTNTGWEAAAQVKLVNTGNFQWEVGLSAGSYVNEVKSLPDDKPIVTARYGGELITEVGSPYASFYGYKTNGVFASQADADAAGLKKLMPDGSYSQFGAGDMIFEEVVKDGIIDEKDRQVIGSPIPTLYGNFNTRFNYKRFTLDAVFSYSYGNEVYNYYRRNLESGSDYSNQTLAMLRRWTGEGQTTVVPRAVYGDPMGNARFSDRWIENGSFLRFKNLTFSYRLPLSSEFIEGLSVWASADNLYTWTSYLGIDPEVAAGNSVFDQGIDNGLLPPTRSFSLGVKINL*