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scnpilot_p_inoc_scaffold_20_210

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 287211..288308

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T332_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 357.0
  • Bit_score: 390
  • Evalue 2.10e-105
  • rbh
lipopolysaccharide biosynthesis protein Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 351.0
  • Bit_score: 402
  • Evalue 5.70e-109
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 357.0
  • Bit_score: 390
  • Evalue 5.90e-106

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1098
ATGGCATCAACAACACAACACAGTAATTTTAAAGAGCTTACATTAACCGATTTGCGTGCAATGCTAAAAGTATGGTGGAAAGCTATGCTCGGAAAGTGGTTGATTATTGTGCTGGTCGGCCTCACCGGCGGAGCAATTGGTCTGGGAGCATCTTTTATTATAAAACCCAAATACACAGCCCATCTGTCATTTGCATTAATTGAAAAGGGAGGGGGCGGCGGAGGCCTGGCATCGCTTGCCTCCAGTTTTGGTCTTGGTGGTTTGTTTGGGGGCGGTGGCAGTGCTTTCAGTGGCGATAATCTGCTTCAAATCCTTCAGTCAAGGTATGCTGTCGAAAGCACCTTGCTTAGTCCCATCGACTTTAATGGGCAAAAGATGACCATGATGGATGCCTATGCACAATTTATGGAAATGGATAAGGGATGGAGAAAGAGTAAAGACCCTCAGCTTGCGTCGATGTCGTTTCCCATTGGTCAGCCACGAGAAACGTTTTCACGCGCTCAGGATAGTGTGCTGTATGAAGTTTATTATCAGTTTGTAAGTTCACGTTTACTCAAAGTAACTCGCCGTGATAAAAAAATCAGTATTGTAACCGTTGATTTTAAAAGTAAAAACGAACAATTCTCGAAAGTGTTTGTCGAAGAGCTAATGAACAGAACTTATGAGTTTTACAAGAATACGCGTACCTCTCAGAGTCGCGTCAATATTGATGTAATGCAGCAAACGGCCGATTCGATACGCAATCTTTATGAAACTGCCATGTCGAGAAGTGCCGGTATATCGCAGGTGAATGTCAACAAGGCTTTTTCAATGGCAGCAGTACCGCGTATGAAATACGAAAATGATGCGCAAATGTACGGAGCTGTATACGGAGAAGTATTGAAAAACTTAGAAACACTAAAACTCGATCTGGCCCGTGAAACACCTTTGGTTCAAATTATTGATACGCCACGTTATCCGCTGAAAAAGGATAAATTGGGTAAAATTAAAGGCATTGCGCTTGGAGGATTTATAGCAGGCATTCTCATTGTGTTTATCCTCACGCTCAACTTCTACCTGTCCGGTAAATTTACGAATTCATACCCGTTACAGGAGTAA
PROTEIN sequence
Length: 366
MASTTQHSNFKELTLTDLRAMLKVWWKAMLGKWLIIVLVGLTGGAIGLGASFIIKPKYTAHLSFALIEKGGGGGGLASLASSFGLGGLFGGGGSAFSGDNLLQILQSRYAVESTLLSPIDFNGQKMTMMDAYAQFMEMDKGWRKSKDPQLASMSFPIGQPRETFSRAQDSVLYEVYYQFVSSRLLKVTRRDKKISIVTVDFKSKNEQFSKVFVEELMNRTYEFYKNTRTSQSRVNIDVMQQTADSIRNLYETAMSRSAGISQVNVNKAFSMAAVPRMKYENDAQMYGAVYGEVLKNLETLKLDLARETPLVQIIDTPRYPLKKDKLGKIKGIALGGFIAGILIVFILTLNFYLSGKFTNSYPLQE*