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scnpilot_p_inoc_scaffold_320_26

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 43781..44362

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides RepID=E1YX49_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 190.0
  • Bit_score: 166
  • Evalue 3.40e-38
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN24072.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 190.0
  • Bit_score: 166
  • Evalue 4.70e-38
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 190.0
  • Bit_score: 165
  • Evalue 2.10e-38

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Taxonomy

Parabacteroides distasonis → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGTCGGGGTTTCTCACACTTGAACAACAGTATATTCACGAACTGAACAGAGGATCGTATCGTGCTTTCGACGCACTGTACACCCTGTATGCGCGAAGGTTGTATGCTTTTGCCCTGAAAATGACAAAATCGCCGGCCGATGCCCGCGAGATTGTGCAGGATACTTTTGTACGTTTGTGGCAAAACCGCGAGAATGTGCTACCCGAAGAGTCGTTTCAAGCTTACCTTTTTACCATCGCCAGGAATGCCATTTTCAACAAAATGCGCAGCCTGATCAATTCACCCGTATTTGTCGATTATATCGATTACATGAATGAAGCAGCGGTTTCGGAAGACACGACTACTTCCACCCTCGAATTCGATGAATTCCGCCGCAAACTCGAAGCGGCCAAAAAATCGCTTTCCGATACACAGCTGAAGGTTTTTGAGCTCAGCAAGGAATGGGCGCTTTCACATGCCGAAATTGCCGGCCGGCTCAATCTGAGCGAGCAAACCGTAAAAAACCAGCTTTCGATTGCACTGAAAATCCTCCGAAAAAAGCTGTCCGACAGTGCCGGAATGTTTGCTCTTTTCTTTCTGTAA
PROTEIN sequence
Length: 194
MSGFLTLEQQYIHELNRGSYRAFDALYTLYARRLYAFALKMTKSPADAREIVQDTFVRLWQNRENVLPEESFQAYLFTIARNAIFNKMRSLINSPVFVDYIDYMNEAAVSEDTTTSTLEFDEFRRKLEAAKKSLSDTQLKVFELSKEWALSHAEIAGRLNLSEQTVKNQLSIALKILRKKLSDSAGMFALFFL*