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scnpilot_p_inoc_scaffold_320_27

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 44486..45493

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=E1YX48_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 324.0
  • Bit_score: 214
  • Evalue 1.90e-52
FecR family protein {ECO:0000313|EMBL:KDS49604.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis similarity UNIPROT
DB: UniProtKB
  • Identity: 36.7
  • Coverage: 324.0
  • Bit_score: 215
  • Evalue 1.50e-52
anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 327.0
  • Bit_score: 213
  • Evalue 9.00e-53

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Taxonomy

Parabacteroides distasonis → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAAAACTAAAAAAATGACCGATTTAGTAACAAAATATTACGAGAACCAGCTTTCGGCGGATGAACTTTCGGCGCTGAAGGAAAGTATTAATGCGGCATCGGACGAAGAGCTCGAAAAAACCCTGAGTGCACTGTGGCAACAGGAAACAGGGAACTTTGCCGACGAAGACACAATTCTCGGAATCAAGCAGGACATCGACCGGTTGAACGCGCGGCAAAAATGGCAGCGCAGGAAGCTGATGCGTATCTTATCCAGAGCTGCGGCCATCATTGCCGTACCCCTGATTGCTGCGTTCACCATCAACCTGCTCGACCGGCTTCCCGCACCTGCGGCCAGCGATATGATAGTGGCGGTTGGTCCGGGCGAAAAAGTGAATATTGTATTACCCGACGGTACCCGGGTAAAATTAAACTCCGAAACCACCCTGAACTACAGCATCAACGATTTCAACCGCAAATCGCGCGAGATCGATCTCAGGGGAGAAGCCTATTTCGAAGTGGCCCGCAACGAACGGAAGCCATTTATAATCAAAACCAACTCGCTCGATGTGAAGGTATTAGGCACGGTCTTCAACCTGCAGGCGCGGGAGGACGAGCTCACCACCGAAATCGATTTGCTGGAAGGCGAAGTGGCACTGACTTCTACCACCACCCACCAGCAGGTACGATTGTATGCCAGCCAGCGGGCGGTGCTCGACAAAAGCACCGGTTCCATACGGATTATTAAAAATGCTCCGCCAGTGGGCGCTGCCTGGGTAAAAGGGGAACTGGTATTCCACGCAACCCCGGTACGCAATGTATTTAAGGCCATCGAACGCAATTACGGAGTAAGCATTCATTTGGATAAGGAAGATACTATTGACAACGACCTGTTTACCGGCCGATTCTCGACAGGCAATCTGAATGAAACGCTCGATATACTGAAAATGCACTATCGTTTCAATTATCAGATTAAAGGGAATGAAGTGGCCATCAGTAATTTCCGGCTGAATCAACGTAAAAATTAA
PROTEIN sequence
Length: 336
MKTKKMTDLVTKYYENQLSADELSALKESINAASDEELEKTLSALWQQETGNFADEDTILGIKQDIDRLNARQKWQRRKLMRILSRAAAIIAVPLIAAFTINLLDRLPAPAASDMIVAVGPGEKVNIVLPDGTRVKLNSETTLNYSINDFNRKSREIDLRGEAYFEVARNERKPFIIKTNSLDVKVLGTVFNLQAREDELTTEIDLLEGEVALTSTTTHQQVRLYASQRAVLDKSTGSIRIIKNAPPVGAAWVKGELVFHATPVRNVFKAIERNYGVSIHLDKEDTIDNDLFTGRFSTGNLNETLDILKMHYRFNYQIKGNEVAISNFRLNQRKN*