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scnpilot_p_inoc_scaffold_510_35

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 42878..43348

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0P3_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 151.0
  • Bit_score: 243
  • Evalue 1.40e-61
transcription elongation factor grea similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 151.0
  • Bit_score: 243
  • Evalue 3.80e-62
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=694427 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 151.0
  • Bit_score: 243
  • Evalue 1.90e-61

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 471
ATGGCAGTAACTTACATGACAGCGGATGGTTATAAAAAACTAGTGGAGGAGCTTAATGAGCTGGAGAGAGTGCAACGTCCCGCTATTTCGAAGCAAATTGCTGAGGCTCGCGACAAAGGCGATCTGTCGGAAAATGCGGAGTATGATGCTGCAAAGGAGGCTCAGGGATTGCTGGAGATGAAAATTTCGCAGCTGAAGGAAACCATTGCCTCTGCACGAATGATCGACGAATCGAAAATAAGCACCGATGAAGTACAGATTTTGAATAAAGTAAAGATCAAAAATGTCAAAACCGGTCAGGTAATGAGCTACATGATCGTGTCGGAGAGCGAAGCCAACCTGAAAGAAGGTAAGCTTTCGGTTACGACCCCCATTGCTAAAGGTTTGCTGGGTAAAAAGGTGGGCGATAAAACCGAAGTGCAGGTTCCATCGGGGCTGATGATATTTGAAGTAATGGATATTTCACTTTAA
PROTEIN sequence
Length: 157
MAVTYMTADGYKKLVEELNELERVQRPAISKQIAEARDKGDLSENAEYDAAKEAQGLLEMKISQLKETIASARMIDESKISTDEVQILNKVKIKNVKTGQVMSYMIVSESEANLKEGKLSVTTPIAKGLLGKKVGDKTEVQVPSGLMIFEVMDISL*