ggKbase home page

scnpilot_p_inoc_scaffold_1311_15

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 10579..11466

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8E4_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 297.0
  • Bit_score: 335
  • Evalue 4.90e-89
  • rbh
rhomboid family protein Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 295.0
  • Bit_score: 346
  • Evalue 5.10e-92
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 297.0
  • Bit_score: 335
  • Evalue 1.40e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 888
ATGAACCTGTTCGATAATCTCAAAATTACCTTTAAGCAGGGCAACCCTGCTATTCGCCTTATTTTTATAAATGCGGCCGTGTATGTAGTGCTGCAGGCTGTGCTTATTTTCTTCAAGTTGTTCAACCTGAGCGGCGAATTTATTTTTCAATGGCTCGCACTGCCGTCGAGCTATTCGCAACTGGTGTATCAGCCCTGGTCCATTGTCAGTTACATGTTTCTTCATCGCGATATTTTTCATATTCTGTTCAATATGCTGGCCCTGTATTGGTTCGGGAAATTGTTTCTGATGTACCATACCGGTAAACAACTAACCGGATTATATTTGTTCGGAGGGATGGTAGCCGGATTGCTGTATATGTTGGCTTACAATATCTTTCCGCTTTTCAGGGGGTTAAATGAGTTTAGTATCCTGATGGGGGCGTCGGGGTCGATCATGGCCATTATTGTTGCCACGGCCATGCAGGCTCCCGATATGGAGATGCGATTTCTTTTGGTGGGAAATGTTAAACTCAAATACATAGCCATCGTTGCGGTGCTCATCAGCTTTTTCAGTATAACTTCGTCGAATGCGGGAGGCGAAATAGCTCACCTCGGCGGCGCTTTGTATGGTTATTTTTTTATCGTATCTTTGCGACGCGGAAAGGATACCACCCGTTGGATTTCAAAAATTATAGACAGGATAAGTACAGCTTTTAAACCACGCAAGCTGAAGGTGAAAAAAGGCGGTGCTTACCGATCGGCCAAAATGTCCGATGCCGATTATAATATGCAGAAAGCCAATACGATGGCCGAGGTTGATCGCATCCTCGACAAGATTAAGGCATCGGGTTACGGTAGTCTGACCGAAGACGAAAAAAATACATTATTTCAACAACGTAAAAATTAG
PROTEIN sequence
Length: 296
MNLFDNLKITFKQGNPAIRLIFINAAVYVVLQAVLIFFKLFNLSGEFIFQWLALPSSYSQLVYQPWSIVSYMFLHRDIFHILFNMLALYWFGKLFLMYHTGKQLTGLYLFGGMVAGLLYMLAYNIFPLFRGLNEFSILMGASGSIMAIIVATAMQAPDMEMRFLLVGNVKLKYIAIVAVLISFFSITSSNAGGEIAHLGGALYGYFFIVSLRRGKDTTRWISKIIDRISTAFKPRKLKVKKGGAYRSAKMSDADYNMQKANTMAEVDRILDKIKASGYGSLTEDEKNTLFQQRKN*