ggKbase home page

scnpilot_p_inoc_scaffold_204_22

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 21519..24701

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HE51_ARTCA similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 999.99
  • Bit_score: 1564
  • Evalue 0.0
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIC58739.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 999.99
  • Bit_score: 1939
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 999.99
  • Bit_score: 1564
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3183
GTGACTGCGCTACCCGAATCTGCATGGGAGAACGACGCCCTTGAGACGCTCGCCGAGCCGCTCGGGTGGCGGCCGGCCAAGGGCGAAGAGGTCGCGCCCGGCACAGGGGAGCGCGACACGTGGGATGACTTGCTCATCCGGCCGCGACTGCTCGAGGCGTTGCGGCGCCTCAACCCCGCGGTGCCCGGTGAGTACCTGCAGCAGGCTGTCGCCGAGATCGCGGCGCCGAAATCGCAGGACGCGATCACCGAGAACCATCGCATCCACCAGTACCTCGTCGGCGGGTACCCGCTCAGCTACATCGACCCCGACGGCGTCGAGCAGAACCCGCGGCTGCGTCTTCTGAGTACAGACCCCAGCGAGAACGACTGGCTCGCGGTGAACCAGCTCACGCTGCGTCAGGGCGACCTGCACCGCCGCCTCGACATCGCGCTCTTCGTCAACGGGATGCCGGTCGTCATCATCGAGCTCAAGCGTGCCGGCTCAGCATCCACCGGCGTCGCCCCCGCCCATGCGCAGCTGCAGACGTATCTGCGCGAGTTCCCGATGGCGTTCCGCTTCTGCGTGCTCACACTTGCGAGCGACGGGCTCGAGGCCAAGTACGGCACGCCCTTCACACCGCTGAACCACTTCGCGCCCTGGAACGTCGACGATGACGGCGCGCCGCTGCAGCAGCCGCGGCTCGAGGGCGCGACCTCGGTCGAACCGATCGATGATGCGCTCGACGGCCTGTTCAACCAGGAGCGATTCCTGCAGCTTGTGCGCAACTTCACGGCATTCGACGAGAACGCCGACGGACTCACGAAGCGCATCGCAAAGCCGCACCAGTACTTCGCAGTGACCAAGGCCGTCGCATCCACCGTGCAGGCGGTCGAAACCAACGGCAAGGCCGGCGTCGTGTGGCACACGCAGGGGTCGGGCAAGTCGATGGAGATGGAGCTGTACACGAACCTCGTGTCGCGGCATCCCAAACTCAAGAATCCCACCGTCGTCGTCGTCACTGACCGCACCGAGCTCGACGGGCAGCTGTTCCAGACGTTCGACCAGAGCCTCCTGCTCGCTGAGAAGCCGGTGCAGGTGCGCGAGCGTGCGCAGCTGCGCGACGAACTGCGCAACCGCATCACGGGTGGCATCTACTTCACGACGCTGCAGAAGTTCGGGCTGACGGATGCCGAGAAGCAGGCGGGCACGCAGCATCCGCTGCTCACCGACCGCCGCAACGTGATCGTCGTCGTCGACGAGGCTCACCGCAGTCACTACGACGACCTCGATGGGTACGCCCGGCACCTGCGCGACGCGCTGCCGAACGCGACACTCATCGCGTTCACGGGCACCCCGATTTCGTTCGCCGAGCGCGACACCCGCGCCGTGTTCGGCGACTACATCGACATCTACGACCTCACTCGCGCCGTCGACGACGGGGCGACCGTGCCGGTCTACTTCGAGCCGCGTCTCATCAAGGTCGCGTTCGCCGCCGAGGCGAGCGAAGAAGACATCGATCGCGCCGCCGACGAGTACACGGTCGGGCTCGACGACACCGAGCGGGCGCGGCTCGAGGCATCCGTCGCCGTCGTGAACGCGGTCTACGGTGCGCCGGAGCGCATCGAGACGCTCGCGGCCGACCTCGTGCGGCACTGGGAAGAGCGCCGGCAGCGGATGACGCCATTCCTCAGCACGCCCGGCAAGGCGCTGATCGTCGGCGGTACCCGTGAGATCTGTGCGCGACTGTACGCCGAGATCGTCGCGTTGCGACCCGACTGGCATTCGGATGCCCTGGATGCCGGGCGCATCAAGGTCGTCTACTCGGGATCGGCGTCAGACCAGCCTCCGGTGAGCGACCACGTGCGCCGCGATTCGGAGAACAAGGCGATCAAGGCGCGGCTGAAGAACGCCGACGACGAGCTCGAACTCGTGATCGTCAAAGACATGATGCTCACCGGCTTCGACGCGCCGCCGCTGCACACCCTCTACCTCGACCGGCCGCTCAAGGGGGCGCTGCTCATGCAGACCCTTGCTCGCGTGAACCGCACGTTCGAGGGCAAGCAGGACGGGTTGCTCGTCGCCTACGCACCGCTCGCCGACAACCTCGCCGAGGCGCTGTCGGAGTACACGGTGTCAGACCGCGAGAACAAACCGATCGGCCGCGACGTCGCCGAAGCCGTGGCGATCGCGACGGAACTCGTCGCCCAGATCCGCGAGATGCTCGCGGGGTGCGACTGGCGGGCGATCGCCGAGGAGGGCGGCTCTCGGGCGTGGCGGAGGGCGGCGACCACCGCGACCAACTTCTTGCGCGACGTGACGAGCCCCTTGAACGCGCCCGACCTCGGCGCCGAGCGGCTGGCGGCGCGGTATCGGGCGGCGACCGGCAAGCTCGCGCGAGCCTGGGCGCTCGCGTCGGGGCGCGCGGGCCTGGCCGAGCTGCACGACGAGATCGCGTTCTACGAAGAGGTCCGCGTGTGGATGGCGAAGTTCGACGCCGCCGAGCGGCAGGCGCGCGACGAGCCCATTCCGGAGGAGATCTCGCGTCTGCTCGGAACGCTCGTCGCCGATTCGATCGCCCCCGGCGAGGTGCTCGACATCTACGACGCGGCGGGGTTGCCGCGGCTGGCACTCGACGATCTCGGGCCCGAGTTCCTCGCGAAGGCGCAGGCGGCGCCGAATGCGCACCTCGCGATCGAAGCGCTGCGCAAGTCGCTGACGGATGCCGGGTCGAGCGCGACGCGCGGCAACCTCGTCCGTCAGCGGGCGTTCTCGGAGCGGATCGCCGAGATCATGAACCGCTACACGAACCAGCAGCTGACGTCGGCCGAGGTCATCGCCGAGCTCGTCGAACTGGCGAAGGACGTCGCTGACGAGGCATCCCGCGGTTCGACCTTCTCGCCGCCGCTATCGAGCGACGAGCTCGCGTTCTACGACGCCGTCGCCGCGAACGAGTCGGCGATCGAGGTGCAGGGGGAGGACGTGCTGGCGCAGATCGCGCGCGAACTCGTCGCCGTGATGCGCCGCGACGTGCGCACCGACTGGACCGTGCGCGACGATGTGCGCGCGAAGCTGCGATCCTCGATCAAGCGACTGCTCGTCAAGTACAAGTACCCGCCCGACAAGCAGCCCGAGGCGATCAAGCTCGTGATGGACCAGATGGAATCGATGGCGCCGCGGTATGCGGGCGAGAGAGGGATGTGA
PROTEIN sequence
Length: 1061
VTALPESAWENDALETLAEPLGWRPAKGEEVAPGTGERDTWDDLLIRPRLLEALRRLNPAVPGEYLQQAVAEIAAPKSQDAITENHRIHQYLVGGYPLSYIDPDGVEQNPRLRLLSTDPSENDWLAVNQLTLRQGDLHRRLDIALFVNGMPVVIIELKRAGSASTGVAPAHAQLQTYLREFPMAFRFCVLTLASDGLEAKYGTPFTPLNHFAPWNVDDDGAPLQQPRLEGATSVEPIDDALDGLFNQERFLQLVRNFTAFDENADGLTKRIAKPHQYFAVTKAVASTVQAVETNGKAGVVWHTQGSGKSMEMELYTNLVSRHPKLKNPTVVVVTDRTELDGQLFQTFDQSLLLAEKPVQVRERAQLRDELRNRITGGIYFTTLQKFGLTDAEKQAGTQHPLLTDRRNVIVVVDEAHRSHYDDLDGYARHLRDALPNATLIAFTGTPISFAERDTRAVFGDYIDIYDLTRAVDDGATVPVYFEPRLIKVAFAAEASEEDIDRAADEYTVGLDDTERARLEASVAVVNAVYGAPERIETLAADLVRHWEERRQRMTPFLSTPGKALIVGGTREICARLYAEIVALRPDWHSDALDAGRIKVVYSGSASDQPPVSDHVRRDSENKAIKARLKNADDELELVIVKDMMLTGFDAPPLHTLYLDRPLKGALLMQTLARVNRTFEGKQDGLLVAYAPLADNLAEALSEYTVSDRENKPIGRDVAEAVAIATELVAQIREMLAGCDWRAIAEEGGSRAWRRAATTATNFLRDVTSPLNAPDLGAERLAARYRAATGKLARAWALASGRAGLAELHDEIAFYEEVRVWMAKFDAAERQARDEPIPEEISRLLGTLVADSIAPGEVLDIYDAAGLPRLALDDLGPEFLAKAQAAPNAHLAIEALRKSLTDAGSSATRGNLVRQRAFSERIAEIMNRYTNQQLTSAEVIAELVELAKDVADEASRGSTFSPPLSSDELAFYDAVAANESAIEVQGEDVLAQIARELVAVMRRDVRTDWTVRDDVRAKLRSSIKRLLVKYKYPPDKQPEAIKLVMDQMESMAPRYAGERGM*