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scnpilot_p_inoc_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 255 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_204_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=3 Tax=Microbacterium RepID=H8E6X1_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans
rpmG; ribosomal protein L33
scnpilot_p_inoc_scaffold_204_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


194..499
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Microbacterium RepID=H8E6X2_9MICO
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpsN; 30S ribosomal protein S14
scnpilot_p_inoc_scaffold_204_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1003..1281
DNA (279bp) protein (93aa)
Histone family protein DNA-binding protein n=2 Tax=Microbacterium RepID=H8E6X3_9MICO
Integration host factor {ECO:0000313|EMBL:KIC58729.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hup; bacterial nucleoid DNA-binding protein
scnpilot_p_inoc_scaffold_204_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1487..3436
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7B5_9MICO rbh
Copper transporter {ECO:0000313|EMBL:EXJ51778.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_204_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3461..4585)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQP1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84482.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
hypothetical protein
scnpilot_p_inoc_scaffold_204_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4621..6024
DNA (1404bp) protein (468aa)
AAA ATPase n=2 Tax=Microbacterium RepID=H8E6X6_9MICO
Helicase {ECO:0000313|EMBL:EXJ51780.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
scnpilot_p_inoc_scaffold_204_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6294..6947)
DNA (654bp) protein (218aa)
Heme oxygenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B7B6_9MICO
Heme oxygenase {ECO:0000313|EMBL:EPD84484.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.
hmuO; heme oxygenase
scnpilot_p_inoc_scaffold_204_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7034..7345)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E6X8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51782.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_204_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7530..8783
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7C2_9MICO
Beta-lactamase {ECO:0000313|EMBL:KIC58762.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
beta-lactamase class C and other penicillin binding proteins
scnpilot_p_inoc_scaffold_204_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8780..9667
DNA (888bp) protein (296aa)
Inner membrane transporter RhtA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQP4_9MICO
Inner membrane transporter RhtA {ECO:0000313|EMBL:EPD84487.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxo
permease, DMT superfamily
scnpilot_p_inoc_scaffold_204_11
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9800..10198)
DNA (399bp) protein (133aa)
heat-shock protein HtpX n=1 Tax=Agromyces italicus RepID=UPI0003B36129
Uncharacterized protein {ECO:0000313|EMBL:KEP75110.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
low molecular weight protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_204_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10301..11350)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XIM2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR75868.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
scnpilot_p_inoc_scaffold_204_13
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11444..12076)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B64A82
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT42077.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
scnpilot_p_inoc_scaffold_204_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12275..14278
DNA (2004bp) protein (668aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003770A35 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL34592.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_204_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14287..15948
DNA (1662bp) protein (554aa)
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system methylase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V3W5_9MICC rbh
Restriction endonuclease subunit M {ECO:0000313|EMBL:KIC58737.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_204_16
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16361..17140
DNA (780bp) protein (260aa)
Putative specificity protein s n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QJE5_9ACTO
Putative specificity protein s {ECO:0000313|EMBL:EHN75451.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus Z
hsdS; type I restriction enzyme S protein
scnpilot_p_inoc_scaffold_204_17
unknown

Not on your lists

17188..17694
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_204_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17840..18502
DNA (663bp) protein (221aa)
Uncharacterized protein n=5 Tax=Corynebacterium RepID=U7KIY7_9CORY
Uncharacterized protein {ECO:0000313|EMBL:KEP75499.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_204_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18519..19667
DNA (1149bp) protein (383aa)
Predicted GTPase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9U2_MICTS
Uncharacterized protein {ECO:0000313|EMBL:EXJ50471.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
GTPase
scnpilot_p_inoc_scaffold_204_20
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19732..20604)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037B096F
Contig113, whole genome shotgun sequence {ECO:0000313|EMBL:KIU56452.1}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
scnpilot_p_inoc_scaffold_204_21
Corynebacterium callunae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20601..21242)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003686EFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG67989.1}; TaxID=1121353 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium callunae DSM 2
scnpilot_p_inoc_scaffold_204_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21519..24701
DNA (3183bp) protein (1061aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HE51_ARTCA
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIC58739.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
HsdR family type I site-specific deoxyribonuclease
scnpilot_p_inoc_scaffold_204_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24704..31141
DNA (6438bp) protein (2146aa)
RecBCD enzyme subunit RecD {ECO:0000313|EMBL:KJL34598.1}; EC=3.1.11.5 {ECO:0000313|EMBL:KJL34598.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
superfamily I DNA and RNA helicase and helicase subunits n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A438 rbh
superfamily I DNA and RNA helicase and helicase subunits
scnpilot_p_inoc_scaffold_204_24
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31314..32627)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI000374224D rbh
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29266.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
carboxylesterase type B
scnpilot_p_inoc_scaffold_204_25
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32624..33916)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEZ2_GEOOG rbh
MFS transporter {ECO:0000313|EMBL:KGN38368.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_204_26
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34028..35026
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00037F75A7
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEE47586.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strai
scnpilot_p_inoc_scaffold_204_27
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35140..35379
DNA (240bp) protein (80aa)
XRE family transcriptional regulator n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037B4084
XRE family transcriptional regulator {ECO:0000313|EMBL:KJR10860.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_204_28
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35372..36682
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036C49C1 rbh
Toxin HipA {ECO:0000313|EMBL:KJR10861.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
toxin-antitoxin system, toxin component
scnpilot_p_inoc_scaffold_204_29
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36949..37992
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000368FBC3 rbh
Contig_77, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02263.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_204_30
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38122..39456
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003652329 rbh
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:KFI79207.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
family 1 extracellular solute-binding protein
Displaying items 1-30 of 255 in total

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