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scnpilot_p_inoc_scaffold_204_27

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 35140..35379

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00037B4084 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 78.0
  • Bit_score: 70
  • Evalue 8.00e-10
XRE family transcriptional regulator {ECO:0000313|EMBL:KJR10860.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 77.0
  • Bit_score: 63
  • Evalue 1.80e-07
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 78.0
  • Bit_score: 62
  • Evalue 6.10e-08

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Taxonomy

Nocardioides luteus → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGTATTCGATGCCAGCACACACGCCGGCGGACCTCGGCGTTGCCCTGCAACAGGCTCGGGTCACGCAGGGACTCAGCCAACGTGACCTTGCCGTCGCTATCGGTGTGTCCCAGCGGTACATCTGGGAGCTCGAAGCTGGCAAGGATTCTCCGGCCCTTACTCGCATCCTCGCGGCTTTCGCGCATCTCGGGGTGACCGTCCGGGTCGACGTCCCGGAGCCGGGGGAGCACCATGGGTGA
PROTEIN sequence
Length: 80
MYSMPAHTPADLGVALQQARVTQGLSQRDLAVAIGVSQRYIWELEAGKDSPALTRILAAFAHLGVTVRVDVPEPGEHHG*