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scnpilot_p_inoc_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 1696 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_0_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

291..1445
DNA (1155bp) protein (385aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B782C3 rbh
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ72965.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
scnpilot_p_inoc_scaffold_0_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1535..3826
DNA (2292bp) protein (764aa)
trehalose synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D4B4B rbh
Glycosidase {ECO:0000313|EMBL:BAJ76640.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycosidase
scnpilot_p_inoc_scaffold_0_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3953..4420
DNA (468bp) protein (156aa)
ATPase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B64CB1
ATPase
ATPase {ECO:0000313|EMBL:BAJ76639.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4490..5170
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B1C39 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB77560.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
scnpilot_p_inoc_scaffold_0_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5227..6912
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sour
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346EB75 rbh
signal transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_0_6
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6894..8057
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B4C1F rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP76079.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
GGDEF domain
scnpilot_p_inoc_scaffold_0_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8069..8446)
DNA (378bp) protein (126aa)
chemotaxis protein CheY n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC849
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ76636.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microba
scnpilot_p_inoc_scaffold_0_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8535..9155
DNA (621bp) protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=979556 species="Bacteria; Ac
dephospho-CoA kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346EE6D rbh
dephospho-CoA kinase
scnpilot_p_inoc_scaffold_0_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9229..11298
DNA (2070bp) protein (690aa)
UvrABC system protein B n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX5_MICTS rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; helicase subunit of the DNA excision repair complex
scnpilot_p_inoc_scaffold_0_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11312..11734
DNA (423bp) protein (141aa)
glyoxalase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488281
lactoylglutathione lyase
Lactoylglutathione lyase {ECO:0000313|EMBL:BAJ76633.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StL
scnpilot_p_inoc_scaffold_0_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11781..12017)
DNA (237bp) protein (79aa)
Rhs family protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX3_MICTS
Rhs family protein
Rhs family protein {ECO:0000313|EMBL:BAJ76632.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).
scnpilot_p_inoc_scaffold_0_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12052..12486
DNA (435bp) protein (145aa)
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003499051
MarR family transcriptional regulator {ECO:0000313|EMBL:KEP75569.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUB
transcriptional regulator
scnpilot_p_inoc_scaffold_0_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12630..15569
DNA (2940bp) protein (980aa)
UvrABC system protein A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGX1_MICTS rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ATPase subunit
scnpilot_p_inoc_scaffold_0_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15573..17516
DNA (1944bp) protein (648aa)
excinuclease ABC subunit C n=1 Tax=Microbacterium sp. B19 RepID=UPI0003466237 rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; nuclease subunit of the excinuclease complex
scnpilot_p_inoc_scaffold_0_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17545..18423
DNA (879bp) protein (293aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF076 rbh
Nucleotide-binding protein HR12_26325 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
P-loop-containing kinase
scnpilot_p_inoc_scaffold_0_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18507..19484
DNA (978bp) protein (326aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW8_MICTS rbh
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
scnpilot_p_inoc_scaffold_0_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19657..20283
DNA (627bp) protein (209aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
Superoxide dismutase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW7_MICTS rbh
superoxide dismutase
scnpilot_p_inoc_scaffold_0_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20388..21398
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae
Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW6_MICTS rbh
gap; glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
scnpilot_p_inoc_scaffold_0_19
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21405..22619
DNA (1215bp) protein (405aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1504156 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW5_MICTS rbh
pgk; 3-phosphoglycerate kinase rbh
scnpilot_p_inoc_scaffold_0_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22610..23398
DNA (789bp) protein (263aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367D793
tpiA; triosephosphate isomerase
scnpilot_p_inoc_scaffold_0_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23512..23760
DNA (249bp) protein (83aa)
Preprotein translocase subunit SecG n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW3_MICTS
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:BAJ76622.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum
scnpilot_p_inoc_scaffold_0_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23762..24115
DNA (354bp) protein (118aa)
RNA polymerase-binding protein RbpA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW2_MICTS
electron transport protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testac
scnpilot_p_inoc_scaffold_0_23
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24168..24911)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JUA2_ARTS2 rbh
hypothetical protein
SPG23_c12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28301.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;
scnpilot_p_inoc_scaffold_0_24
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24908..26356)
DNA (1449bp) protein (483aa)
polysaccharide deacetylase n=2 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B541DE rbh
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACL41510.1}; Flags: Precursor;; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorop
scnpilot_p_inoc_scaffold_0_25
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26401..28203)
DNA (1803bp) protein (601aa)
glutamine amidotransferase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B35225 rbh
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|SAAS:SAAS00039584}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" sou
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
scnpilot_p_inoc_scaffold_0_26
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28203..29267)
DNA (1065bp) protein (355aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6F553
nucleoside-diphosphate sugar epimerase
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHD23048.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivoran
scnpilot_p_inoc_scaffold_0_27
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29264..30595)
DNA (1332bp) protein (444aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3D186
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KEP75355.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
nucleotide sugar dehydrogenase
scnpilot_p_inoc_scaffold_0_28
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30884..32251
DNA (1368bp) protein (456aa)
UPI0003D6CD40 related cluster n=1 Tax=unknown RepID=UPI0003D6CD40
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AHD23046.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
scnpilot_p_inoc_scaffold_0_29
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32204..34732)
DNA (2529bp) protein (843aa)
LuxR family transcriptional regulator n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003615FE5
Uncharacterized protein {ECO:0000313|EMBL:KEP74967.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_0_30
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34920..35711)
DNA (792bp) protein (264aa)
6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGW1_MICTS rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:KEP74965.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase rbh
Displaying items 1-30 of 1696 in total

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