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scnpilot_p_inoc_scaffold_249

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_249_1
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1512
DNA (1512bp) protein (504aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003483495
NDP-hexose 4-ketoreductase {ECO:0000313|EMBL:KEP74527.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
clpC; ATPase with chaperone activity, ATP-binding subunit
scnpilot_p_inoc_scaffold_249_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1542..2084
DNA (543bp) protein (181aa)
N-acetylglutamate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344DF11 rbh
N-acetylglutamate synthase
N-acetylglutamate synthase {ECO:0000313|EMBL:BAJ74025.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
scnpilot_p_inoc_scaffold_249_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2092..2787
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5B72D rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ74024.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_249_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2885..4417)
DNA (1533bp) protein (511aa)
amino acid ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC37A rbh
amino acid transporters rbh
Amino acid transporters {ECO:0000313|EMBL:BAJ74023.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_249_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4565..5920
DNA (1356bp) protein (452aa)
glutamate--ammonia ligase, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B380F9 rbh
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:BAJ74022.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037
scnpilot_p_inoc_scaffold_249_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5901..6674
DNA (774bp) protein (258aa)
Predicted glutamine amidotransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFX6_MICTS rbh
glutamine amidotransferase rbh
Predicted glutamine amidotransferase {ECO:0000313|EMBL:BAJ74021.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum
scnpilot_p_inoc_scaffold_249_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6671..8026
DNA (1356bp) protein (452aa)
aldehyde dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003498CF3 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEP74532.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_249_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8070..8849
DNA (780bp) protein (260aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003457F76 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KEP74533.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
dehydrogenase with different specificities
scnpilot_p_inoc_scaffold_249_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8874..9590
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5D6B rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ74018.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
scnpilot_p_inoc_scaffold_249_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9728..10138
DNA (411bp) protein (137aa)
dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345CED5
anaerobic dehydrogenase, typically selenocysteine-containing
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:BAJ74017.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
scnpilot_p_inoc_scaffold_249_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10403..11800)
DNA (1398bp) protein (466aa)
DNA repair protein RadA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003473F7B rbh
radA; ATP-dependent serine protease
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
scnpilot_p_inoc_scaffold_249_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11962..12915)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=979556 species="Bacteria; Actinobacteri
lactate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BAAE9 rbh
malate/lactate dehydrogenase
scnpilot_p_inoc_scaffold_249_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13352..13966)
DNA (615bp) protein (205aa)
FOG: Ankyrin repeat n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFW8_MICTS
Ankyrin repeat
FOG: Ankyrin repeat {ECO:0000313|EMBL:BAJ74013.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037)
scnpilot_p_inoc_scaffold_249_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14003..14878)
DNA (876bp) protein (292aa)
hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2F266 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE74248.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebras
scnpilot_p_inoc_scaffold_249_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15030..15869
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345D7CB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01774.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
UspA domain-containing protein
scnpilot_p_inoc_scaffold_249_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15904..16734)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000348943A rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01774.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
uspa domain-containing protein
scnpilot_p_inoc_scaffold_249_17
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16808..17443)
DNA (636bp) protein (212aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348CE9C rbh
two-component system regulatory protein
Two-component system, regulatory protein {ECO:0000313|EMBL:AAT89920.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyl
scnpilot_p_inoc_scaffold_249_18
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17440..19110)
DNA (1671bp) protein (557aa)
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034640A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC65924.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
two-component system sensor protein
scnpilot_p_inoc_scaffold_249_19
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19228..19764
DNA (537bp) protein (179aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003468708
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41078.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
scnpilot_p_inoc_scaffold_249_20
unknown

Not on your lists

comp(19871..20557)
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_249_21
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20903..21259)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C6EDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV84460.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
scnpilot_p_inoc_scaffold_249_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21358..22197)
DNA (840bp) protein (280aa)
universal stress protein UspA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A670D rbh
UspA domain-containing protein {ECO:0000313|EMBL:CDJ99641.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
UspA domain-containing protein
scnpilot_p_inoc_scaffold_249_23
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22334..23392
DNA (1059bp) protein (353aa)
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034621FA rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:EYT59228.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
adh; alcohol dehydrogenase
scnpilot_p_inoc_scaffold_249_24
unknown

Not on your lists

comp(23468..24118)
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_249_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24657..26018
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346F945
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74857.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_249_26
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26231..26809
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F26F88
Putative phosphatidylinositol kinase {ECO:0000313|EMBL:GAD33789.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1
scnpilot_p_inoc_scaffold_249_27
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26806..28428
DNA (1623bp) protein (541aa)
L-lactate permease, C-terminal n=1 Tax=Microbacterium sp. TS-1 RepID=U2YIV3_9MICO rbh
L-lactate permease, C-terminal {ECO:0000313|EMBL:GAD32824.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
putative L-lactate permease
scnpilot_p_inoc_scaffold_249_28
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28523..29215
DNA (693bp) protein (231aa)
membrane-associated phospholipid phosphatase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC8B8 rbh
Phospholipid phosphatase {ECO:0000313|EMBL:KEP75258.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
membrane-associated phospholipid phosphatase rbh
scnpilot_p_inoc_scaffold_249_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29232..30035
DNA (804bp) protein (268aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CF4B8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73993.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_249_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30039..30662)
DNA (624bp) protein (208aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D26E8 rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ73992.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
Displaying items 1-30 of 138 in total

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