ggKbase home page

scnpilot_p_inoc_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_358_1
unknown

Not on your lists

1..150
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(201..1547)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB4_NIAKG
Adenylosuccinate lyase
scnpilot_p_inoc_scaffold_358_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1607..2347
DNA (741bp) protein (247aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=929713 species=
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364DF57
hypothetical protein
scnpilot_p_inoc_scaffold_358_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2422..6843
DNA (4422bp) protein (1474aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB1_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEV99351.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_358_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6907..8019
DNA (1113bp) protein (371aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=509635 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBS8_9SPHI
GDP-mannose 4,6-dehydratase
scnpilot_p_inoc_scaffold_358_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8016..8954
DNA (939bp) protein (313aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Rudanella lutea RepID=UPI00035E544B
GDP-L-fucose synthase
scnpilot_p_inoc_scaffold_358_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9016..9963)
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKS6_CHIPD rbh
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU62142.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_358_8
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9960..11069)
DNA (1110bp) protein (370aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EAY29756.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EAY29756.1};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; M
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZI88_9BACT rbh
UDP-N-acetylglucosamine 2-epimerase
scnpilot_p_inoc_scaffold_358_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11133..12284)
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKS8_CHIPD rbh
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU62144.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_358_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12285..13097)
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPG6_CHIPD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACU60602.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pin
scnpilot_p_inoc_scaffold_358_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13110..14114
DNA (1005bp) protein (335aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NLU0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_358_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14145..15062)
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Haemophilus influenzae RepID=C4EXN5_HAEIF
Putative glycosyltransferase {ECO:0000313|EMBL:GAO43713.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
hypothetical protein
scnpilot_p_inoc_scaffold_358_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15147..17630)
DNA (2484bp) protein (828aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLT8_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17302.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_358_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17721..18029
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378D97C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17303.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_358_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18004..18801
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLT6_9SPHI rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF14766.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_358_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18962..19426)
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY9_NIAKG
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW00588.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain D
scnpilot_p_inoc_scaffold_358_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19433..20371)
DNA (939bp) protein (313aa)
Mg2 transporter protein CorA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY8_NIAKG
Putative MIT family transporter {ECO:0000313|EMBL:GAO43672.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavih
Mg2 transporter protein CorA family protein
scnpilot_p_inoc_scaffold_358_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20409..21194)
DNA (786bp) protein (262aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=700598 species="Bacteria; Bact
Diaminopimelate epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY7_NIAKG rbh
diaminopimelate epimerase
scnpilot_p_inoc_scaffold_358_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21306..22184)
DNA (879bp) protein (293aa)
Purine or other phosphorylase family 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPE8_9SPHI rbh
phosphorylase
Phosphorylase {ECO:0000313|EMBL:AHF15028.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_358_20
unknown

Not on your lists

comp(23143..23256)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_21
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23282..23977)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF20126.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_p_inoc_scaffold_358_22
unknown

Not on your lists

24085..24324
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_23
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24547..25437
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363A85A rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ81328.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sour
scnpilot_p_inoc_scaffold_358_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25434..26441
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000376061F rbh
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ACU64041.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sourc
scnpilot_p_inoc_scaffold_358_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26579..27487
DNA (909bp) protein (303aa)
Chloride peroxidase {ECO:0000313|EMBL:ADZ81327.1}; EC=1.11.1.10 {ECO:0000313|EMBL:ADZ81327.1};; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
Chloride peroxidase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4S8_SPHS2 rbh
chloride peroxidase
scnpilot_p_inoc_scaffold_358_26
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28342..29004
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN94337.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
scnpilot_p_inoc_scaffold_358_27
unknown

Not on your lists

29011..29139
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_358_28
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29160..29651
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WA20_MARHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG97239.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hyd
scnpilot_p_inoc_scaffold_358_29
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(29906..30622)
DNA (717bp) protein (239aa)
hypothetical protein id=133596 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT43704.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
hypothetical protein
scnpilot_p_inoc_scaffold_358_30
unknown

Not on your lists

30670..30825
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 1-30 of 82 in total

View Taxonomy