ggKbase home page

scnpilot_p_inoc_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 492 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_17_1
unknown

Not on your lists

comp(3..443)
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_17_2
unknown

Not on your lists

594..686
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_17_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(784..2073)
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTC9_9SPHI
scnpilot_p_inoc_scaffold_17_4
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

2218..3768
DNA (1551bp) protein (517aa)
Por secretion system C-terminal sorting domain containing protein id=3098206 bin=GWF2_Bacteroidetes_43_63 species=Chryseobacterium sp. CF314 genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
hypothetical protein Tax=GWF2_Bacteroidetes_43_63_curated
hypothetical protein
scnpilot_p_inoc_scaffold_17_5
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3830..4516)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003033D7C
Membrane protein {ECO:0000313|EMBL:KIA89172.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis
lycopene cyclase domain-containing protein
scnpilot_p_inoc_scaffold_17_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4533..5684)
DNA (1152bp) protein (384aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG77_NIAKG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEW02716.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_17_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5830..6270
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FC455
MarR family transcriptional regulator {ECO:0000313|EMBL:KIC91124.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_17_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6299..8086
DNA (1788bp) protein (596aa)
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG81_NIAKG
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIC91125.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter
butyryl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_17_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8154..8276)
DNA (123bp) protein (41aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_17_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8361..8630)
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG
DNA-binding protein HU-beta {ECO:0000313|EMBL:GAO41975.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
histone family protein DNA-binding protein
scnpilot_p_inoc_scaffold_17_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8925..9233)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK46_CHIPD
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_17_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9240..10004)
DNA (765bp) protein (255aa)
exodeoxyribonuclease III n=1 Tax=Niabella aurantiaca RepID=UPI00036C7AB3
Exodeoxyribonuclease III {ECO:0000313|EMBL:KIC96156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
exodeoxyribonuclease III
scnpilot_p_inoc_scaffold_17_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10090..12756)
DNA (2667bp) protein (889aa)
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
methionine synthase n=1 Tax=Segetibacter koreensis RepID=UPI000370C780
methionine synthase
scnpilot_p_inoc_scaffold_17_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12840..13838)
DNA (999bp) protein (333aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000382B986 rbh
methionine synthase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
methionine synthase
scnpilot_p_inoc_scaffold_17_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14082..15950)
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBB8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02501.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_p_inoc_scaffold_17_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15972..16496)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSK1_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08552.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadens
scnpilot_p_inoc_scaffold_17_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16591..17940)
DNA (1350bp) protein (450aa)
1,4-alpha-glucan-branching protein Tax=GWB2_Bacteroidetes_41_8_curated
alpha amylase catalytic subunit id=2037273 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
alpha amylase catalytic region
scnpilot_p_inoc_scaffold_17_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18029..18526)
DNA (498bp) protein (166aa)
DinB family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N9_NIAKG
DinB family protein
DinB family protein {ECO:0000313|EMBL:AEW00232.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
scnpilot_p_inoc_scaffold_17_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18556..19530)
DNA (975bp) protein (325aa)
Homospermidine synthase (Spermidine-specific) n=1 Tax=Niabella soli DSM 19437 RepID=H1NRC2_9SPHI
deoxyhypusine synthase
Deoxyhypusine synthase {ECO:0000313|EMBL:AHF16531.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437
scnpilot_p_inoc_scaffold_17_20
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19612..20196)
DNA (585bp) protein (195aa)
Glutathione peroxidase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MV21_9SPHI
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_p_inoc_scaffold_17_21
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20193..21566)
DNA (1374bp) protein (458aa)
Aldehyde dehydrogenase n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H308_MICAE
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1160283 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_17_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21601..22038
DNA (438bp) protein (146aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriale
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI6_NIAKG
CMP/dCMP deaminase zinc-binding protein
scnpilot_p_inoc_scaffold_17_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22168..22773
DNA (606bp) protein (202aa)
Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Superoxide dismutase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ05_9SPHI
superoxide dismutase
scnpilot_p_inoc_scaffold_17_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22838..23479)
DNA (642bp) protein (214aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J7_NIAKG
Pyridoxamine 5'-phosphate oxidase
scnpilot_p_inoc_scaffold_17_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23485..25389)
DNA (1905bp) protein (635aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Niabella soli DSM 19437 RepID=H1NNN5_9SPHI
redoxin
Redoxin {ECO:0000313|EMBL:AHF15233.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_17_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25463..25792)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E99E8
Uncharacterized protein {ECO:0000313|EMBL:KIC91083.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_17_27
unknown

Not on your lists

comp(25859..26320)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_17_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26510..28321
DNA (1812bp) protein (604aa)
GTP-binding protein TypA n=1 Tax=Segetibacter koreensis RepID=UPI000361BF38
GTP-binding protein TypA {ECO:0000313|EMBL:KIC95234.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
GTP-binding protein TypA
scnpilot_p_inoc_scaffold_17_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28403..29644)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUB6_9FLAO rbh
Kef-type K+ transport system membrane protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
sodium/hydrogen exchanger
scnpilot_p_inoc_scaffold_17_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29804..31381)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037D1FF4
Peptidase M28 family protein {ECO:0000313|EMBL:GAO42395.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
peptidase M28
Displaying items 1-30 of 492 in total

View Taxonomy