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scnpilot_p_inoc_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_130_1
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(1..570)
-----------------
DNA (570bp)
protein (190aa)
restriction endonuclease subunit S n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BE405
Type I restriction-modification system specificity determinant {ECO:0000313|EMBL:KKR51780.1}; TaxID=1618946 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_40_20.;"
type I restriction-modification system specificity determinant
scnpilot_p_inoc_scaffold_130_2
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(567..2129)
-----------------
DNA (1563bp)
protein (521aa)
type I restriction-modification system subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
type I restriction-modification system subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] id=5803700 bin=OD1_GWC2_34_28 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
type I restriction-modification system subunit M (EC:2.1.1.72)
scnpilot_p_inoc_scaffold_130_3
unknown

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2162..2338
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_130_4
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2335..3297)
-----------------
DNA (963bp)
protein (321aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RWZ5_9FLAO rbh
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFF16315.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
D-3-phosphoglycerate dehydrogenase
scnpilot_p_inoc_scaffold_130_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3440..3850)
-----------------
DNA (411bp)
protein (137aa)
ketosteroid isomerase n=1 Tax=Burkholderia bryophila RepID=UPI000381B9E5
Uncharacterized protein {ECO:0000313|EMBL:KIF82109.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
scnpilot_p_inoc_scaffold_130_6
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3916..4890)
-----------------
DNA (975bp)
protein (325aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K658_9BACT
Alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:CCG99611.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella a
scnpilot_p_inoc_scaffold_130_7
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4950..5732)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE3E07
Uncharacterized protein {ECO:0000313|EMBL:KFF29218.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_130_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5738..6025)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein n=1 Tax=Kingella denitrificans ATCC 33394 RepID=F0F0T2_9NEIS
YCII-related {ECO:0000313|EMBL:AJH00867.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
YCII-related protein
scnpilot_p_inoc_scaffold_130_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6081..7433)
-----------------
DNA (1353bp)
protein (451aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E9A5E rbh
peptidase, S41 family Tax=GWE2_Bacteroidetes_32_14_curated
Peptidase S41 family protein
scnpilot_p_inoc_scaffold_130_10
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(7578..7940)
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7S3_CALAS
hypothetical protein
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
scnpilot_p_inoc_scaffold_130_11
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7990..8442)
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0N758_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB90689.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
hypothetical protein
scnpilot_p_inoc_scaffold_130_12
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8454..9341)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002D376B1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65227.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
scnpilot_p_inoc_scaffold_130_13
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9451..10194)
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E4B40
Uncharacterized protein {ECO:0000313|EMBL:ESU18686.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
abortive infection protein
scnpilot_p_inoc_scaffold_130_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10213..10977)
-----------------
DNA (765bp)
protein (255aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370895F rbh
LytTR family transcriptional regulator
LytTR family transcriptional regulator {ECO:0000313|EMBL:AKD56029.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotoler
scnpilot_p_inoc_scaffold_130_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10974..12026)
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003679C6A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56176.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_130_16
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12019..13110)
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366C268
signal transduction histidine kinase LytS
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:AEW85410.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_130_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13260..13874)
-----------------
DNA (615bp)
protein (205aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NM69_9SPHI
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHF14730.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
scnpilot_p_inoc_scaffold_130_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13874..15814)
-----------------
DNA (1941bp)
protein (647aa)
ATP-binding region ATPase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX22_PEDHD
ATPase
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ACU04316.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
scnpilot_p_inoc_scaffold_130_19
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15997..17304
-----------------
DNA (1308bp)
protein (436aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAR3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO96124.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ens
hypothetical protein
scnpilot_p_inoc_scaffold_130_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17401..18054
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM59_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17278.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_130_21
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18081..18893
-----------------
DNA (813bp)
protein (271aa)
peptidase M48, Ste24p id=16791869 bin=RBG_16_Aminicenantes_63_16_plus species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM rbh
peptidase M48, Ste24p
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_p_inoc_scaffold_130_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18909..22817
-----------------
DNA (3909bp)
protein (1303aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XX19_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU04313.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_130_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22905..25058
-----------------
DNA (2154bp)
protein (718aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM64_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17274.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_130_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25090..26283
-----------------
DNA (1194bp)
protein (398aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2F2_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17282.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_130_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26355..27458
-----------------
DNA (1104bp)
protein (368aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM66_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_130_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27473..28660
-----------------
DNA (1188bp)
protein (396aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM66_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_130_27
unknown

Not on your lists

comp(29556..30008)
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_130_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30011..34678)
-----------------
DNA (4668bp)
protein (1556aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA78_NIAKG rbh
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEW03416.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
scnpilot_p_inoc_scaffold_130_29
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34706..35221)
-----------------
DNA (516bp)
protein (172aa)
Glutathione peroxidase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G094_ECHVK
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola
scnpilot_p_inoc_scaffold_130_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35251..39414)
-----------------
DNA (4164bp)
protein (1388aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDI9_CHIPD rbh
YD repeat protein {ECO:0000313|EMBL:ACU59568.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chiti
hypothetical protein
Displaying items 1-30 of 179 in total

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