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scnpilot_p_inoc_scaffold_49

Search features with annotation key words

Displaying items 511-540 of 644 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_49_511
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(592676..594187)
DNA (1512bp) protein (504aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase subunit M {ECO:0000313|EMBL:AGG88617.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AGG88617.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
NADH dehydrogenase subunit M n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS8_9GAMM rbh
scnpilot_p_inoc_scaffold_49_512
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(594323..596329)
DNA (2007bp) protein (669aa)
NADH dehydrogenase subunit L (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=mine drainage metagenome RepID=T1BJ97_9ZZZZ rbh
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:KJV36910.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="L
scnpilot_p_inoc_scaffold_49_513
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(596425..596736)
DNA (312bp) protein (104aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Rudaea cellulosilytica RepID=UPI0003621063
scnpilot_p_inoc_scaffold_49_514
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(596733..597371)
DNA (639bp) protein (213aa)
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:EIL88971.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EIL88971.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP30_9GAMM
NADH:ubiquinone oxidoreductase subunit J
scnpilot_p_inoc_scaffold_49_515
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(597390..597881)
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH dehydrogenase subunit I n=1 Tax=Dyella ginsengisoli RepID=UPI00034AF230
NADH-quinone oxidoreductase subunit I
scnpilot_p_inoc_scaffold_49_516
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(597883..598911)
DNA (1029bp) protein (343aa)
NADH:ubiquinone oxidoreductase subunit 1 (chain H) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS3_9GAMM rbh
scnpilot_p_inoc_scaffold_49_517
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(598908..601313)
DNA (2406bp) protein (802aa)
NADH dehydrogenase subunit G {ECO:0000313|EMBL:EIL99947.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EIL99947.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
NADH dehydrogenase subunit G (EC:1.6.5.3)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370FE93
scnpilot_p_inoc_scaffold_49_518
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(601486..602799)
DNA (1314bp) protein (438aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit F n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKF7_9GAMM rbh
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:EIL99948.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
scnpilot_p_inoc_scaffold_49_519
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602900..603427)
DNA (528bp) protein (176aa)
NADH dehydrogenase subunit E n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031F5218
NADH dehydrogenase {ECO:0000313|EMBL:KJV36917.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.
NADH dehydrogenase subunit E
scnpilot_p_inoc_scaffold_49_520
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(604098..605372)
DNA (1275bp) protein (425aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH-quinone oxidoreductase subunit D n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIA9_9GAMM
scnpilot_p_inoc_scaffold_49_521
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(605374..606114)
DNA (741bp) protein (247aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIB0_9GAMM
NADH dehydrogenase
scnpilot_p_inoc_scaffold_49_522
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(606124..606678)
DNA (555bp) protein (185aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=GWF1_Xanthomonadales_69_6_curated
NADH-quinone oxidoreductase subunit B id=2698515 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
NADH dehydrogenase
scnpilot_p_inoc_scaffold_49_523
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(606954..607310)
DNA (357bp) protein (119aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Dyella japonica RepID=UPI0002F20DC3
NADH-quinone oxidoreductase subunit A
scnpilot_p_inoc_scaffold_49_524
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(607681..608160)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349B4D5
preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:AHX13003.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jia
scnpilot_p_inoc_scaffold_49_525
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(608189..608935)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN86_9GAMM
scnpilot_p_inoc_scaffold_49_526

Not on your lists

609172..609981
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=mine drainage metagenome RepID=T0ZU81_9ZZZZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EQD48127.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
short-chain dehydrogenase of unknown substrate specificity
scnpilot_p_inoc_scaffold_49_527
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(610180..612081)
DNA (1902bp) protein (634aa)
Sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase {ECO:0000313|EMBL:EKU26220.1}; EC=2.7.1.25 {ECO:0000313|EMBL:EKU26220.1};; EC=2.7.7.4 {ECO:0000313|EMBL:EKU26220.1};; TaxID=1195885 spec
adenylyltransferase (EC:2.7.1.25 2.7.7.4)
Sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z5L0_XANCT
scnpilot_p_inoc_scaffold_49_528
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(612065..612973)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenyla
cysD2; sulfate adenylyltransferase subunit 2 (2), small subunit (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG76_9GAMM
scnpilot_p_inoc_scaffold_49_529
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(613172..613864)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037E49FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47157.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_49_530
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(613861..615006)
DNA (1146bp) protein (382aa)
Putative permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM5_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIL87766.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus
membrane protein
scnpilot_p_inoc_scaffold_49_531

Not on your lists

comp(615170..615715)
DNA (546bp) protein (182aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EQD32916.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EQD32916.1};; TaxID=410659 species="unclassified sequences; metagenomes;
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=mine drainage metagenome RepID=T0YCC1_9ZZZZ
scnpilot_p_inoc_scaffold_49_532
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(615803..616486)
DNA (684bp) protein (228aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI77224.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
scnpilot_p_inoc_scaffold_49_533
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616589..617647
DNA (1059bp) protein (353aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSS2_9GAMM
scnpilot_p_inoc_scaffold_49_534
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617644..618348
DNA (705bp) protein (235aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BE5B0
scnpilot_p_inoc_scaffold_49_535
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

618410..619120
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WSS0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77227.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
Protein of unknown function (DUF3108)
scnpilot_p_inoc_scaffold_49_536
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619139..620752)
DNA (1614bp) protein (538aa)
Alcohol/choline dehydrogenase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GUK3_9GAMM rbh
alcohol/choline dehydrogenase
Alcohol/choline dehydrogenase {ECO:0000313|EMBL:AJD47286.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivora
scnpilot_p_inoc_scaffold_49_537
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(620820..622079)
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000347269E
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
scnpilot_p_inoc_scaffold_49_538
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(622079..622315)
DNA (237bp) protein (79aa)
BolA-like protein n=1 Tax=mine drainage metagenome RepID=T1ADJ8_9ZZZZ
BolA family transcriptional regulator {ECO:0000313|EMBL:KGO98800.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
putative transcriptional regulator, BolA superfamily
scnpilot_p_inoc_scaffold_49_539
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

622462..623478
DNA (1017bp) protein (339aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1162282 species="Bacteria; Proteobacter
D-arabinose 5-phosphate isomerase n=1 Tax=Dyella ginsengisoli RepID=UPI0003477C00
KpsF/GutQ family protein
scnpilot_p_inoc_scaffold_49_540
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

623697..624212
DNA (516bp) protein (172aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSE3_9GAMM
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EIM02385.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Displaying items 511-540 of 644 in total

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