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scnpilot_p_inoc_scaffold_49

Search features with annotation key words

Displaying items 541-570 of 644 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_49_541
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

624209..624787
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRN2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90206.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_49_542
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

624747..625406
DNA (660bp) protein (220aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN5_9GAMM
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
lipopolysaccharide transport periplasmic protein LptA
scnpilot_p_inoc_scaffold_49_543
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625415..626134
DNA (720bp) protein (240aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR02_9GAMM rbh
ABC-type (unclassified) transport system, ATPase component Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ABC-type (unclassified) transport system, ATPase component
scnpilot_p_inoc_scaffold_49_544
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

626425..627858
DNA (1434bp) protein (478aa)
RNA polymerase subunit sigma-54 n=1 Tax=Dyella japonica RepID=UPI00031BB5E1 rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizu
RNA polymerase subunit sigma-54
scnpilot_p_inoc_scaffold_49_545
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628065..628385
DNA (321bp) protein (107aa)
Ribosomal subunit interface protein (Fragment) n=3 Tax=mine drainage metagenome RepID=T0YGB3_9ZZZZ
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:GAN45858.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sou
ribosomal subunit interface protein
scnpilot_p_inoc_scaffold_49_546
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628434..629378
DNA (945bp) protein (315aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
serine kinase of the HPr protein, regulates carbohydrate metabolism (EC:2.7.1.-)
HPr kinase/phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR05_9GAMM
scnpilot_p_inoc_scaffold_49_547
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

629425..630270
DNA (846bp) protein (282aa)
UPF0042 nucleotide-binding protein UUC_10667 n=1 Tax=Rhodanobacter denitrificans RepID=I4WR06_9GAMM
Nucleotide-binding protein VI08_13110 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="
putative P-loop-containing kinase
scnpilot_p_inoc_scaffold_49_548
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630340..630771
DNA (432bp) protein (144aa)
PTS fructose transporter subunit IIA n=1 Tax=Dyella ginsengisoli RepID=UPI000345CA88
phosphotransferase system, mannose/fructose-specific component IIA
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:AGG90213.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
scnpilot_p_inoc_scaffold_49_549
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

630966..631235
DNA (270bp) protein (90aa)
phosphocarrier protein HPr n=1 Tax=Dyella japonica RepID=UPI0002D524AE
phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:AIF47139.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.
scnpilot_p_inoc_scaffold_49_550
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631232..632968
DNA (1737bp) protein (579aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D6C41
phosphoenolpyruvate-protein phosphotransferase
scnpilot_p_inoc_scaffold_49_551
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633041..634510
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89088.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_p_inoc_scaffold_49_552
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

634663..635427
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB05_9GAMM rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIL96646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
enoyl-CoA hydratase/carnithine racemase
scnpilot_p_inoc_scaffold_49_553
unknown

Not on your lists

comp(635424..635576)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_49_554
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

635787..636464
DNA (678bp) protein (226aa)
Putative transmembrane protein n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XQV1_RALSO rbh
RSp1117; transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAD18268.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sola
scnpilot_p_inoc_scaffold_49_555
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

636565..636978
DNA (414bp) protein (138aa)
UPI0003D04A10 related cluster n=1 Tax=unknown RepID=UPI0003D04A10
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_49_556
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(637099..638619)
DNA (1521bp) protein (507aa)
multidrug resistance protein B n=1 Tax=Dyella ginsengisoli RepID=UPI00034C905B
Multidrug resistance protein B {ECO:0000313|EMBL:KGI76725.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagri
EmrB/QacA subfamily drug resistance transporter
scnpilot_p_inoc_scaffold_49_557
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(638772..640331)
DNA (1560bp) protein (520aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY43_9GAMM rbh
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_p_inoc_scaffold_49_558
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(640492..641718)
DNA (1227bp) protein (409aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEV0_9GAMM rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL97991.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
multidrug resistance efflux pump
scnpilot_p_inoc_scaffold_49_559
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(641715..643211)
DNA (1497bp) protein (499aa)
NodT family efflux transporter outer membrane lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU8_9GAMM rbh
NodT family efflux transporter outer membrane lipoprotein {ECO:0000313|EMBL:EIL90989.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodan
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_p_inoc_scaffold_49_560
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(643376..643834)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BBD41
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AIF46419.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
scnpilot_p_inoc_scaffold_49_561
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

643957..644442
DNA (486bp) protein (162aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter denitrificans RepID=I4WN04_9GAMM
Lipid A 3-O-deacylase (PagL)
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:AGG87328.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
scnpilot_p_inoc_scaffold_49_562
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(644577..645431)
DNA (855bp) protein (285aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE4_9GAMM rbh
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL89085.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
sulfurtransferase
scnpilot_p_inoc_scaffold_49_563
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(645428..646033)
DNA (606bp) protein (202aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR0_9GAMM
NTP pyrophosphohydrolase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
NUDIX hydrolase
scnpilot_p_inoc_scaffold_49_564
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646418..647134)
DNA (717bp) protein (239aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR2_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_p_inoc_scaffold_49_565
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(647272..648105)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR4_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89669.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_49_566
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648107..649948)
DNA (1842bp) protein (614aa)
DNA mismatch repair protein MutL n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB11_9GAMM rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
mutL; DNA mismatch repair protein
scnpilot_p_inoc_scaffold_49_567
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(650060..651466)
DNA (1407bp) protein (469aa)
LOG family protein ygdH n=1 Tax=Dyella japonica RepID=UPI000317DB07
LOG family protein {ECO:0000313|EMBL:GAN45218.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
LOG family protein
scnpilot_p_inoc_scaffold_49_568
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(651471..652076)
DNA (606bp) protein (202aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI0003097BC8
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimona
membrane protein
scnpilot_p_inoc_scaffold_49_569
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(652080..652865)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7S1_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL95512.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source=
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_49_570
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(652862..653191)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376596A
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimi
hypothetical protein
Displaying items 541-570 of 644 in total

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