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scnpilot_p_inoc_scaffold_49

Search features with annotation key words

Displaying items 571-600 of 644 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_49_571
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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653303..653881
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
superoxide dismutase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E4E46
superoxide dismutase
scnpilot_p_inoc_scaffold_49_572
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(653922..655361)
DNA (1440bp) protein (480aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1163409 species="Bacter
Phosphoglucosamine mutase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI07_9GAMM rbh
phosphoglucosamine mutase
scnpilot_p_inoc_scaffold_49_573
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(655471..656373)
DNA (903bp) protein (301aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377C50B rbh
dihydropteroate synthase
scnpilot_p_inoc_scaffold_49_574
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(656460..658295)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380C89F rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_49_575
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(658292..660103)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B4D4AF
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
scnpilot_p_inoc_scaffold_49_576

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comp(660100..662172)
DNA (2073bp) protein (691aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F34B69 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_49_577

Not on your lists

comp(662264..664210)
DNA (1947bp) protein (649aa)
Cell division protein FtsH (Fragment) n=2 Tax=mine drainage metagenome RepID=T1BEF8_9ZZZZ rbh
Cell division protein FtsH {ECO:0000313|EMBL:EQD68217.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hflB; ATP-dependent metalloprotease
scnpilot_p_inoc_scaffold_49_578
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(664305..664970)
DNA (666bp) protein (222aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
23S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI00031030ED
23S rRNA methyltransferase
scnpilot_p_inoc_scaffold_49_579

Not on your lists

665075..665371
DNA (297bp) protein (99aa)
RNA-binding, CRM domain protein n=1 Tax=mine drainage metagenome RepID=T1CJZ8_9ZZZZ
RNA-binding, CRM domain protein {ECO:0000313|EMBL:EQD68215.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA-binding protein YhbY
scnpilot_p_inoc_scaffold_49_580
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

665456..665872
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW93_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78114.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_49_581
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(665989..667062)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000300BE8E
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AIF48421.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_49_582
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(667110..667712)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQX5_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26647.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthom
scnpilot_p_inoc_scaffold_49_583
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(667720..668400)
DNA (681bp) protein (227aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
L-isoaspartate protein carboxylmethyltransferase type II n=1 Tax=mine drainage metagenome RepID=T1B6H0_9ZZZZ
protein-L-isoaspartate O-methyltransferase
scnpilot_p_inoc_scaffold_49_584
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(668397..669212)
DNA (816bp) protein (272aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1379159 spe
5'-nucleotidase SurE n=1 Tax=Rhodanobacter sp. 115 RepID=I4VK59_9GAMM
stationary phase survival protein SurE
scnpilot_p_inoc_scaffold_49_585
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(669282..669638)
DNA (357bp) protein (119aa)
Cell division protein FtsB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA3_9GAMM
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rh
septum formation initiator
scnpilot_p_inoc_scaffold_49_586
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(669650..670963)
DNA (1314bp) protein (438aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPH4_9GAMM
scnpilot_p_inoc_scaffold_49_587
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(671102..671938)
DNA (837bp) protein (279aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D4E06
2-dehydro-3-deoxyphosphooctonate aldolase
scnpilot_p_inoc_scaffold_49_588
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(672009..673676)
DNA (1668bp) protein (556aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS75_9GAMM
CTP synthase
scnpilot_p_inoc_scaffold_49_589
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

673950..675767
DNA (1818bp) protein (606aa)
peptidase M24 n=1 Tax=Dyella japonica RepID=UPI0002ED0BC6 rbh
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AIF48437.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_49_590
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

675855..678116
DNA (2262bp) protein (754aa)
LPS-assembly protein LptD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVH4_9GAMM rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
organic solvent tolerance protein
scnpilot_p_inoc_scaffold_49_591
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

678368..679771
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003485C62
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
molecular chaperone SurA
scnpilot_p_inoc_scaffold_49_592
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

679768..680793
DNA (1026bp) protein (342aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVN0_9GAMM
scnpilot_p_inoc_scaffold_49_593

Not on your lists


680800..681624
DNA (825bp) protein (275aa)
rRNA adenine dimethylase {ECO:0000313|EMBL:EQD62524.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD62524.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dra
dimethyladenosine transferase (EC:2.1.1.-)
rRNA adenine dimethylase n=2 Tax=mine drainage metagenome RepID=T1CAC7_9ZZZZ rbh
scnpilot_p_inoc_scaffold_49_594
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

681621..682043
DNA (423bp) protein (141aa)
Protein ApaG n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXJ2_9GAMM
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
uncharacterized protein affecting Mg2+/Co2+ transport
scnpilot_p_inoc_scaffold_49_595
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

682063..682899
DNA (837bp) protein (279aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xan
diadenosine tetraphosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI0003471C7F
symmetrical bis(5'-nucleosyl)-tetraphosphatase
scnpilot_p_inoc_scaffold_49_596
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(682954..683385)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MKP4_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05277.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
scnpilot_p_inoc_scaffold_49_597

Not on your lists

comp(683436..684596)
DNA (1161bp) protein (387aa)
Butyryl-CoA dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1B999_9ZZZZ
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EQD69491.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acyl-CoA dehydrogenase domain-containing protein
scnpilot_p_inoc_scaffold_49_598
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

685014..685943
DNA (930bp) protein (310aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM77_9GAMM rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIM00569.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodan
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_49_599
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

685940..687046
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363F934
5-methyltetrahydrofolate--homocysteine methyltransferase
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AHX12653.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.
scnpilot_p_inoc_scaffold_49_600
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

687164..689854
DNA (2691bp) protein (897aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM75_9GAMM rbh
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EIM00567.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
Displaying items 571-600 of 644 in total

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