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scnpilot_p_inoc_scaffold_49_545

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 628065..628385

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein (Fragment) n=3 Tax=mine drainage metagenome RepID=T0YGB3_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 105.0
  • Bit_score: 122
  • Evalue 2.40e-25
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:GAN45858.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 97.0
  • Bit_score: 129
  • Evalue 2.10e-27
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 101.0
  • Bit_score: 113
  • Evalue 4.00e-23

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGCAAATCCAGGTCAGCGGTCACCAGATCGAAATCACCCCGGCCCTGCGCGATTACGTCGATGCGCGCCGCGAACGCCTCGCGCGCCGTTTCGATCACCTGACTTCGCTCAACGTGGTGCTGGAAGTGGAGAAGAATCGTCTGGCCAATCGCGCGGAAGCGACGCTGGCCGCAGCCGGCAAGGTCCTGCACGCGGATGCGGTGGACAACGACATGTACGCCGCGATCGACGCGTTGTTCGACAAGCTCGATGCCCAGGTCCGCAAGCACAAGGACAAGCGGCGCACGCACGGGCGAGATGACATCAGGGACCTCGCCTAG
PROTEIN sequence
Length: 107
MQIQVSGHQIEITPALRDYVDARRERLARRFDHLTSLNVVLEVEKNRLANRAEATLAAAGKVLHADAVDNDMYAAIDALFDKLDAQVRKHKDKRRTHGRDDIRDLA*