ggKbase home page

scnpilot_p_inoc_scaffold_49_542

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 624747..625406

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 220.0
  • Bit_score: 158
  • Evalue 8.00e-36
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 220.0
  • Bit_score: 158
  • Evalue 1.10e-35
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 197.0
  • Bit_score: 146
  • Evalue 1.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGTCCACGCCACGCTCGCGCCGCATGTGCACACGAATTGACCTGCCGGCTCGCCTGCTCGTGCTGCTCGTCGCGGCGTTGGCGGCGTGCGGCGTGGCGCAGGCCAGGCAGTCGGACAAGAACCAACCCATCAACCTCAATGCCACGCACCTGATCGGCAGCCAGCAGAGCGGCAAGTTGGTTGTAACCGGCAACGTGGCTTTGGATCAAGGCACTTTCCACGCCGACGGCGCCCAGGCCACCGGCTACACCGATCCCAACGACACCAGCCAATGGCAGCGCGTGGTGCTGACCGGCAATCCCACCCACTTCCGGCAAACCCAGGACAGCGGCACACTGGTGCGCGGCCAGGCGCAAACGCTCGACTACAAGGTTTCCGAAAACACCGTGATCCTCACCGGCAATGCGACCGTGGAGCAGGAAGGCCGCGGCACGTTCCACGGCGAGAAACTCGTCTACAACACCGACACCGGCGAAATCGAGGGCAGCGCTGCCGCAGGCGGCCGCGTGCACATCACCTTGCAACCGCGCAGCAAACCGGCCGCGACCAGCGCCCGGCCGGCGCCCGCGGGAACGCCGGCTTCGGCAAGTTCCGCGCAACCCGCGGCGGCTGCGACCGCTGCCCCGACTTCCGCTTCCACGTCTGCCGGAACGCACTAG
PROTEIN sequence
Length: 220
MSTPRSRRMCTRIDLPARLLVLLVAALAACGVAQARQSDKNQPINLNATHLIGSQQSGKLVVTGNVALDQGTFHADGAQATGYTDPNDTSQWQRVVLTGNPTHFRQTQDSGTLVRGQAQTLDYKVSENTVILTGNATVEQEGRGTFHGEKLVYNTDTGEIEGSAAAGGRVHITLQPRSKPAATSARPAPAGTPASASSAQPAAAATAAPTSASTSAGTH*