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scnpilot_p_inoc_scaffold_58

Search features with annotation key words

Displaying items 121-150 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_58_121
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142102..142683)
DNA (582bp) protein (194aa)
Glycine cleavage system transcriptional repressor n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIU6_9GAMM
Glycine cleavage system regulatory protein {ECO:0000313|EMBL:KJV37020.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source=
glycine cleavage system regulatory protein
scnpilot_p_inoc_scaffold_58_122
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142762..143652
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dihydrodipicolinate synthase n=1 Tax=Dyella japonica RepID=UPI0002FD8B01 rbh
dihydrodipicolinate synthase
scnpilot_p_inoc_scaffold_58_123
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143649..144275
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96518.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_58_124
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144342..144665)
DNA (324bp) protein (108aa)
Ferredoxin (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AXX1_9ZZZZ
Ferredoxin {ECO:0000313|EMBL:GAN45917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
4Fe-4S ferredoxin
scnpilot_p_inoc_scaffold_58_125
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145007..146395
DNA (1389bp) protein (463aa)
Poly(A) polymerase I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB20_9GAMM rbh
Poly(A) polymerase {ECO:0000313|EMBL:GAN45916.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
poly(A) polymerase
scnpilot_p_inoc_scaffold_58_126
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146399..146887
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003781EA0
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:KGI77903.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
scnpilot_p_inoc_scaffold_58_127
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147077..148033
DNA (957bp) protein (319aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1543381 species="Bacteria; Proteobacte
FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKV0_9GAMM rbh
scnpilot_p_inoc_scaffold_58_128
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148030..151026
DNA (2997bp) protein (999aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365FD79
scnpilot_p_inoc_scaffold_58_129
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151206..151994)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA1_9GAMM rbh
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:EIL88692.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_p_inoc_scaffold_58_130
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152164..153021)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DCA8C4
Uncharacterized protein {ECO:0000313|EMBL:KGI77622.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_58_131
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153156..154622)
DNA (1467bp) protein (489aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB0_9GAMM rbh
scnpilot_p_inoc_scaffold_58_132
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154644..154982
DNA (339bp) protein (113aa)
iron-sulfur cluster assembly protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349DFEC
Fe-S cluster assembly protein HesB
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:AHX12455.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
scnpilot_p_inoc_scaffold_58_133
unknown

Not on your lists

154989..155735
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F6502
scnpilot_p_inoc_scaffold_58_134

Not on your lists


155868..156260
DNA (393bp) protein (131aa)
30S ribosomal protein S6 n=1 Tax=mine drainage metagenome RepID=T1CEN4_9ZZZZ
30S ribosomal protein S6 {ECO:0000313|EMBL:EQD47608.1}; 30S ribosomal subunit protein S6 {ECO:0000313|EMBL:EQD64474.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenome
30S ribosomal protein S6
scnpilot_p_inoc_scaffold_58_135
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


156260..156532
DNA (273bp) protein (91aa)
30S ribosomal protein S18 n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KW95_9GAMM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrim
30S ribosomal protein S18
scnpilot_p_inoc_scaffold_58_136
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


156746..157195
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003AA48B4
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
scnpilot_p_inoc_scaffold_58_137
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157361..157792
DNA (432bp) protein (144aa)
FeS assembly SUF system regulator, gammaproteobacterial n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS9_9GAMM
FeS assembly SUF system regulator, gammaproteobacterial {ECO:0000313|EMBL:EIL97838.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanob
transcriptional regulator, BadM/Rrf2 family
scnpilot_p_inoc_scaffold_58_138
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157803..159242
DNA (1440bp) protein (480aa)
cysteine desulfurase activator complex subunit SufB n=1 Tax=Dyella japonica RepID=UPI0002EC8831
cysteine desulfurase
Cysteine desulfurase {ECO:0000313|EMBL:AHX12349.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_58_139
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159406..160170
DNA (765bp) protein (255aa)
transporter n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EC5AB
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIL87356.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
sufC; iron ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_58_140
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160167..161486
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348C554 rbh
FeS assembly protein SufD {ECO:0000313|EMBL:EIL97835.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
Iron-regulated ABC transporter permease protein SufD
scnpilot_p_inoc_scaffold_58_141
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161483..162874
DNA (1392bp) protein (464aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1543381 species="Bacteria; Proteo
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003654728
scnpilot_p_inoc_scaffold_58_142
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162871..163449
DNA (579bp) protein (193aa)
Putative acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKC9_9GAMM
putative acyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_58_143
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164089..164409
DNA (321bp) protein (107aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WLV7_9GAMM
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EIM00449.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthom
benzene 1,2-dioxygenase
scnpilot_p_inoc_scaffold_58_144
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164481..165869)
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Sensor histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5I9_9GAMM rbh
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_58_145
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165859..166533)
DNA (675bp) protein (225aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6H7_FRAAD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFC85966.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
scnpilot_p_inoc_scaffold_58_146

Not on your lists

comp(166565..167131)
DNA (567bp) protein (189aa)
HutD n=1 Tax=mine drainage metagenome RepID=T0ZNJ3_9ZZZZ
HutD {ECO:0000313|EMBL:EQD46042.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_58_147
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167166..167705)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W530_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45919.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_58_148
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167720..168037)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6301
competence protein ComEA
Competence protein ComEA {ECO:0000313|EMBL:AHX12375.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
scnpilot_p_inoc_scaffold_58_149
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168238..169683
DNA (1446bp) protein (482aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5K1_9GAMM rbh
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHX12376.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_58_150
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169859..170284
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F2BDE
N-acetyltransferase GCN5 Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
N-acetyltransferase GCN5
Displaying items 121-150 of 287 in total

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