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scnpilot_p_inoc_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_58_1

Not on your lists

comp(1..1026)
DNA (1026bp) protein (342aa)
Zinc metallopeptidase RseP n=1 Tax=mine drainage metagenome RepID=T1CRD7_9ZZZZ
Zinc metallopeptidase RseP {ECO:0000313|EMBL:EQD71680.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peptidase
scnpilot_p_inoc_scaffold_58_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1142..1975)
DNA (834bp) protein (278aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FD39B0
phosphatidate cytidylyltransferase
scnpilot_p_inoc_scaffold_58_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1991..2761)
DNA (771bp) protein (257aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
UDP pyrophosphate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CE431
UDP diphosphate synthase
scnpilot_p_inoc_scaffold_58_4

Not on your lists

comp(2853..3410)
DNA (558bp) protein (186aa)
ribosome recycling factor n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6586
Ribosome recycling factor {ECO:0000313|EMBL:EQD71684.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
frr; ribosome recycling factor
scnpilot_p_inoc_scaffold_58_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3584..4537)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037F3E8A
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KGQ19613.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysoba
peptidylprolyl isomerase
scnpilot_p_inoc_scaffold_58_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4534..5703)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037ECD85 rbh
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:AHX13144.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_58_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5753..7906)
DNA (2154bp) protein (718aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C784E
scnpilot_p_inoc_scaffold_58_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8169..8657)
DNA (489bp) protein (163aa)
GCN5 family acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B502A4
GCN5-related N-acetyltransferase; K06977 Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
putative acetyltransferase, GNAT superfamily
scnpilot_p_inoc_scaffold_58_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8920..10383)
DNA (1464bp) protein (488aa)
Glutamate synthase, NADH/NADPH small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W883_9GAMM rbh
Glutamate synthase, NADH/NADPH small subunit {ECO:0000313|EMBL:EIL95674.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
gltD; glutamate synthase, NADH/NADPH, small subunit domain protein
scnpilot_p_inoc_scaffold_58_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10395..15089)
DNA (4695bp) protein (1565aa)
Glutamate synthase, large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W884_9GAMM rbh
Glutamate synthase, large subunit {ECO:0000313|EMBL:EIL95675.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
glutamate synthase
scnpilot_p_inoc_scaffold_58_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15816..16439)
DNA (624bp) protein (208aa)
ORF208 n=1 Tax=Pseudomonas stutzeri RepID=Q8GEC6_PSEST
ORF208 {ECO:0000313|EMBL:AAN16060.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perf
scnpilot_p_inoc_scaffold_58_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16903..17643)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.36 1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89738.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89738.1};; EC=1.1.1.36 {ECO:0000313|EMBL:AGG89738.1};; TaxID=666685 species="Bacteria; Prote
3-ketoacyl-ACP reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E4584
scnpilot_p_inoc_scaffold_58_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17760..18653)
DNA (894bp) protein (298aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD5_9GAMM
glutamyl-queuosine tRNA(Asp) synthetase
scnpilot_p_inoc_scaffold_58_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..19169)
DNA (504bp) protein (168aa)
Hemerythrin HHE cation binding domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W939_9GAMM
Hemerythrin HHE cation binding domain-containing protein {ECO:0000313|EMBL:EIL95980.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
hypothetical protein
scnpilot_p_inoc_scaffold_58_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19414..21405
DNA (1992bp) protein (664aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF87_9GAMM rbh
Oligopeptide transporter, OPT family protein {ECO:0000313|EMBL:EIL98128.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
putative oligopeptide transporter, OPT family
scnpilot_p_inoc_scaffold_58_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21467..22357
DNA (891bp) protein (297aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1379159 species="Bacteria; Proteobacte
Protease HtpX n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ39_9GAMM rbh
protease HtpX
scnpilot_p_inoc_scaffold_58_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22431..24299
DNA (1869bp) protein (623aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD7_9GAMM rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
molecular chaperone of HSP90 family
scnpilot_p_inoc_scaffold_58_18
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24477..24872
DNA (396bp) protein (132aa)
ribosome-associated heat shock protein Hsp15 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031B5AC6
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
RNA-binding S4 domain-containing protein
scnpilot_p_inoc_scaffold_58_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(24869..26191)
DNA (1323bp) protein (441aa)
amino acid permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative amino acid permease; K03759 arginine:agmatine antiporter id=12557355 bin=CNBR_ACIDO species=Pseudomonas alcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
amino acid permease-associated protein
scnpilot_p_inoc_scaffold_58_20
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

26267..27070
DNA (804bp) protein (268aa)
dimethylargininase; K01482 dimethylargininase [EC:3.5.3.18] Tax=RBG_16_Chloroflexi_54_18_curated
Dimethylargininase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W486_9GAMM
amidinotransferase
scnpilot_p_inoc_scaffold_58_21

Not on your lists

27219..28898
DNA (1680bp) protein (560aa)
Uncharacterized protein n=3 Tax=mine drainage metagenome RepID=T1D4M0_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD76449.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_58_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29075..29896
DNA (822bp) protein (274aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW5_9GAMM
Response regulator receiver protein {ECO:0000313|EMBL:EIL92756.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
response regulator containing a CheY-like receiver domain and a GGDEF domain
scnpilot_p_inoc_scaffold_58_23
unknown

Not on your lists

comp(29933..30433)
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_58_24
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30777..33380)
DNA (2604bp) protein (868aa)
DNA mismatch repair protein MutS n=1 Tax=Dyella japonica RepID=UPI0002E956B4
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
DNA mismatch repair protein MutS
scnpilot_p_inoc_scaffold_58_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33518..33889
DNA (372bp) protein (124aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8N4_9GAMM
CopY family transcriptional regulator {ECO:0000313|EMBL:EIL95825.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
beta-lactamase
scnpilot_p_inoc_scaffold_58_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33876..35180
DNA (1305bp) protein (435aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ07_9GAMM rbh
antirepressor regulating drug resistance protein
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGG88048.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
scnpilot_p_inoc_scaffold_58_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35348..36037
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES8_9GAMM rbh
transcriptional regulator PhoB
Transcriptional regulator PhoB {ECO:0000313|EMBL:AHX12599.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangnin
scnpilot_p_inoc_scaffold_58_28
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36034..37074
DNA (1041bp) protein (347aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349AECA rbh
histidine kinase
scnpilot_p_inoc_scaffold_58_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37234..38421)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIQ1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99342.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_58_30
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38774..39802
DNA (1029bp) protein (343aa)
phosphate-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI00026307FE
phosphate ABC transporter substrate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomona
Displaying items 1-30 of 287 in total

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