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scnpilot_p_inoc_scaffold_116

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Displaying items 31-60 of 286 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_116_31
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33675..34220
DNA (546bp) protein (182aa)
Acireductone dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI1_9GAMM
hypothetical protein, contains double-stranded beta-helix domain Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein, contains double-stranded beta-helix domain
scnpilot_p_inoc_scaffold_116_32
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34238..34723
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D8736
Membrane-flanked domain-containing protein {ECO:0000313|EMBL:EIK94541.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
membrane-flanked domain-containing protein
scnpilot_p_inoc_scaffold_116_33
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34720..35424
DNA (705bp) protein (235aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=
Enolase-phosphatase E1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQJ7_9GAMM
haloacid dehalogenase
scnpilot_p_inoc_scaffold_116_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35421..36491
DNA (1071bp) protein (357aa)
Peptidase C13 family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH9_9GAMM rbh
Peptidase C13 family
Peptidase C13 family {ECO:0000313|EMBL:AGG88525.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
scnpilot_p_inoc_scaffold_116_35
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

36488..37396
DNA (909bp) protein (303aa)
nucleotidyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5A8E3
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AKC83138.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
scnpilot_p_inoc_scaffold_116_36
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

37393..38490
DNA (1098bp) protein (366aa)
Phosphotransferase family protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AXL2_9BACT
hypothetical protein Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
aminoglycoside phosphotransferase
scnpilot_p_inoc_scaffold_116_37
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38637..39110
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C40E5
oxidoreductase iron-sulfur binding subunit
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ABQ32196.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.
scnpilot_p_inoc_scaffold_116_38
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39107..41452
DNA (2346bp) protein (782aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding {ECO:0000313|EMBL:EGO94320.1}; EC=1.3.99.16 {ECO:0000313|EMBL:EGO94320.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphapro
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=2 Tax=Acidiphilium RepID=A5G2W3_ACICJ rbh
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase rbh
scnpilot_p_inoc_scaffold_116_39
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41493..42563
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003477E3A rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48094.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_116_40
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42560..43195
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CEAFB
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:AHX13119.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" sou
scnpilot_p_inoc_scaffold_116_41
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43414..44487
DNA (1074bp) protein (358aa)
elaC; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000313|EMBL:BAI96186.1}; EC=3.1.26.11 {ECO:0000313|EMBL:BAI96186.1};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
Ribonuclease Z n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z0Q4_SPHJU
scnpilot_p_inoc_scaffold_116_42
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44589..45236)
DNA (648bp) protein (216aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.6.1.31 3.5.4.19)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodanobacter denitrificans RepID=M4NEY1_9GAMM rbh
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales
scnpilot_p_inoc_scaffold_116_43
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45233..46003)
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase subunit hisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG6_9GAMM rbh
scnpilot_p_inoc_scaffold_116_44
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45997..46728)
DNA (732bp) protein (244aa)
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH3_9GAMM
scnpilot_p_inoc_scaffold_116_45
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46725..47309)
DNA (585bp) protein (195aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYS5_FRAAD
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
scnpilot_p_inoc_scaffold_116_46
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47306..48373)
DNA (1068bp) protein (356aa)
imidazoleglycerol-phosphate dehydratase (EC:3.1.3.15 4.2.1.19)
imidazoleglycerol-phosphate dehydratase n=1 Tax=Dyella japonica RepID=UPI00030642DB rbh
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" sou
scnpilot_p_inoc_scaffold_116_47
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48370..49461)
DNA (1092bp) protein (364aa)
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
histidinol-phosphate aminotransferase n=1 Tax=Dyella ginsengisoli RepID=UPI000347EC31 rbh
scnpilot_p_inoc_scaffold_116_48
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49458..50786)
DNA (1329bp) protein (443aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8F7_9GAMM rbh
histidinol dehydrogenase
scnpilot_p_inoc_scaffold_116_49
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50783..51673)
DNA (891bp) protein (297aa)
ATP phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W688_9GAMM rbh
ATP phosphoribosyltransferase
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
scnpilot_p_inoc_scaffold_116_50

Not on your lists

comp(51670..52005)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AGB3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD59536.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TrpR
scnpilot_p_inoc_scaffold_116_51
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52173..54065)
DNA (1893bp) protein (631aa)
Histidine ammonia-lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8F4_9GAMM
histidine ammonia-lyase
Histidine ammonia-lyase {ECO:0000313|EMBL:AHX13738.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_116_52
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54123..54416)
DNA (294bp) protein (98aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDH9_NITSI
Excinuclease ABC subunit C {ECO:0000313|EMBL:KDB50424.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natan
excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_116_53
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54486..55892)
DNA (1407bp) protein (469aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase (EC:6.1.1.21)
histidyl-tRNA synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BF0D5
scnpilot_p_inoc_scaffold_116_54
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56238..56597)
DNA (360bp) protein (120aa)
Type IV pilus assembly PilZ n=5 Tax=Stenotrophomonas maltophilia RepID=G0K0C4_STEMA
type IV pilus assembly PilZ; K02676 type IV pilus assembly protein PilZ Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
pilZ; type IV pilus assembly protein PilZ
scnpilot_p_inoc_scaffold_116_55
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56652..57677)
DNA (1026bp) protein (342aa)
Putative LmbE-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP18_9GAMM
GlcNAc-PI de-N-acetylase
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AHX12773.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis
scnpilot_p_inoc_scaffold_116_56
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57736..58734)
DNA (999bp) protein (333aa)
DNA polymerase III subunit delta'''' n=1 Tax=Dyella ginsengisoli RepID=UPI0003456A57
DNA polymerase III subunit delta'
DNA polymerase III subunit delta {ECO:0000313|EMBL:AHX12772.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
scnpilot_p_inoc_scaffold_116_57
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58731..59363)
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1217721 species="Bacteria; Proteobacteria; Gam
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CDBBC
thymidylate kinase
scnpilot_p_inoc_scaffold_116_58
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59360..60409)
DNA (1050bp) protein (350aa)
Aminodeoxychorismate lyase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP15_9GAMM rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EIL88956.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
hypothetical protein
scnpilot_p_inoc_scaffold_116_59
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60406..61230)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D8169A
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AIF47735.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.
scnpilot_p_inoc_scaffold_116_60
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61227..62639)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP13_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88954.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
anthranilate/para-aminobenzoate synthase component I
Displaying items 31-60 of 286 in total

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