ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_116_55

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(56652..57677)

Top 3 Functional Annotations

Value Algorithm Source
Putative LmbE-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP18_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 314.0
  • Bit_score: 221
  • Evalue 1.60e-54
GlcNAc-PI de-N-acetylase similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 314.0
  • Bit_score: 226
  • Evalue 1.10e-56
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:AHX12773.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 314.0
  • Bit_score: 226
  • Evalue 5.20e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTGCGTCGGCATCCCGCGCACGACCAAAGGAAGTGCCGGCTTGCGCCAGCAAAACACCGACCTGCTCGATCCCGATGCACTGCTGAAACGCCCGGGCGCCCGCCTGATGGTGCTGGCGCCGCACCCGGACGACGAGTCGCTGGCCGCGGGCGGGCTGATCCAGCGCGCCCTGCGTTACGGCGTGCAGGTCGACGTGGTGTTCGTCAGCGACGGCGAAAACAATCCGTGGCCGCAGCGCCTGCTGGAACGCCGCATCCGGATCGGCGAGAAGCAGCGCATTGCCTGGGGGCAGCGCCGGCGCGGCGAAGCCGACGTGGCCCTGCACGCGCTCGGGGCGGGGCGCGTCGGGGTGCACCGGCTGGGCTGGCCGGACGGCGGCGTGACCTGGATGCTGCTCGACGATACGGCTTCGATGCTGGCCGGCATGTGCGGGCTGATCGAGCGTGCGCGCCCGACGCTGCTGGTATTGCCGGACCTGGTCGACCGCCATCCCGACCACAGCGCGCTGCACGTGCTGATGGAGATGGTGTTCCAGAAGTTGCCGGCCGATGCGAAGCCCGAGTGCCTGGGGTATCTGCTGCACGGCCGCTCGCAACCCGGCGTGCGGCGGCGCGCGGTGTTCACGCTGGATGGCGACGAACGGGCGCGCAAGCGAGTCGCGATCGAAGCCCACGCCAGCCAGACCGCGCTCAGCCGTGGCCGCCTGTTGCGCTTCGCCGCGGAGACGGAGACTTTCGTCGCGGGACTGGACAGCCATGATCGCGCGGGCACCACCTTGCCGTGGCGGCCGCCATGGCTGTTGCGGCCCGCACTGGCGCTGCTGGTGGTGGATGGAGCCGGCGGCATGAAAGTGCCGCTCGGCGTGCGTGGCGATGCCAACCTGTTCTGGCGCGACGGCAGTCCCGCGGCACGCAGTTCACGCGTCCTGCAGCCGCCGTATTACGTCAAGCTGTATTGCCCGTTGCCGTCGCCATGGGTGTTCGACGGCTGGGGCTGGTGCCGGTTCGGAACCGCGCGCGCTTGA
PROTEIN sequence
Length: 342
MCVGIPRTTKGSAGLRQQNTDLLDPDALLKRPGARLMVLAPHPDDESLAAGGLIQRALRYGVQVDVVFVSDGENNPWPQRLLERRIRIGEKQRIAWGQRRRGEADVALHALGAGRVGVHRLGWPDGGVTWMLLDDTASMLAGMCGLIERARPTLLVLPDLVDRHPDHSALHVLMEMVFQKLPADAKPECLGYLLHGRSQPGVRRRAVFTLDGDERARKRVAIEAHASQTALSRGRLLRFAAETETFVAGLDSHDRAGTTLPWRPPWLLRPALALLVVDGAGGMKVPLGVRGDANLFWRDGSPAARSSRVLQPPYYVKLYCPLPSPWVFDGWGWCRFGTARA*