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scnpilot_p_inoc_scaffold_203

Search features with annotation key words

Displaying items 61-90 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_203_61
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(65922..66209)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NSP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF93761.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium
hypothetical protein
scnpilot_p_inoc_scaffold_203_62
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(66556..69081)
DNA (2526bp) protein (842aa)
N-6 DNA methylase n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EE94_CHLL2 rbh
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:ACD89228.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limico
scnpilot_p_inoc_scaffold_203_63
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(69231..71756)
DNA (2526bp) protein (842aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWC2_Nitrospirae_57_13_curated
Type III restriction protein res subunit id=1935625 bin=GWD2_Nitrospirae-related_57_8 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits rbh
restriction endonuclease subunit R
scnpilot_p_inoc_scaffold_203_64
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71910..72257)
DNA (348bp) protein (116aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT1_9GAMM
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:EIL99372.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
toxin ChpB
scnpilot_p_inoc_scaffold_203_65
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72254..72505)
DNA (252bp) protein (84aa)
SpoVT/AbrB domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT2_9GAMM
SpoVT/AbrB domain-containing protein {ECO:0000313|EMBL:EIL99373.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
scnpilot_p_inoc_scaffold_203_66
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72753..74045)
DNA (1293bp) protein (431aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TIH9_STEMA
scnpilot_p_inoc_scaffold_203_67
unknown

Not on your lists

comp(74226..74399)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_203_68
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(74502..74795)
DNA (294bp) protein (98aa)
Excinuclease ABC C subunit domain-containing protein id=1714986 bin=GWA2_Elusimicrobia_69_24 species=Rhodanobacter fulvus genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative endonuclease containing a URI domain Tax=GWA2_Elusimicrobia_69_24_curated
putative endonuclease containing a URI domain
scnpilot_p_inoc_scaffold_203_69
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74862..75749)
DNA (888bp) protein (296aa)
membane protease HflC n=1 Tax=Dyella japonica RepID=UPI0002DA5D8D
membane protease HflC
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_203_70

Not on your lists

comp(75746..76897)
DNA (1152bp) protein (384aa)
HflK n=1 Tax=mine drainage metagenome RepID=T0Y810_9ZZZZ
HflK {ECO:0000313|EMBL:EQD31271.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
HflK protein
scnpilot_p_inoc_scaffold_203_71
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77133..78437)
DNA (1305bp) protein (435aa)
GTPase HflX n=1 Tax=Rhodanobacter denitrificans RepID=I4WV77_9GAMM rbh
GTPase HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
scnpilot_p_inoc_scaffold_203_72

Not on your lists

comp(78437..78697)
DNA (261bp) protein (87aa)
Host factor Hfq n=1 Tax=mine drainage metagenome RepID=T1CB62_9ZZZZ
Host factor Hfq {ECO:0000313|EMBL:EQD62919.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA-binding protein Hfq
scnpilot_p_inoc_scaffold_203_73
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78781..79752)
DNA (972bp) protein (324aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000319FB87 rbh
tRNA dimethylallyltransferase
scnpilot_p_inoc_scaffold_203_74

Not on your lists

79839..80873
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:EQD64163.1}; EC=1.1.1.103 {ECO:0000313|EMBL:EQD64163.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="min
L-threonine 3-dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1B6R9_9ZZZZ
L-threonine 3-dehydrogenase
scnpilot_p_inoc_scaffold_203_75
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81044..82243
DNA (1200bp) protein (400aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV0_9GAMM
scnpilot_p_inoc_scaffold_203_76
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82314..84647)
DNA (2334bp) protein (778aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00035DE749 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGI77573.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein rbh
scnpilot_p_inoc_scaffold_203_77
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84925..87867)
DNA (2943bp) protein (981aa)
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor n=1 Tax=Dyella ginsengisoli RepID=UPI000344E95E rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGI77571.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
TonB-dependent receptor
scnpilot_p_inoc_scaffold_203_78
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87939..88994)
DNA (1056bp) protein (352aa)
Glucokinase {ECO:0000313|EMBL:EIL90885.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL90885.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
Glucokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ4_9GAMM
glucokinase
scnpilot_p_inoc_scaffold_203_79
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89302..90615
DNA (1314bp) protein (438aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0L4_9GAMM rbh
Glucose/galactose transporter {ECO:0000313|EMBL:EIL93005.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
major facilitator transporter
scnpilot_p_inoc_scaffold_203_80
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90644..91666
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365DFC6
LacI family transcriptional regulator {ECO:0000313|EMBL:KGI77569.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="O
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_203_81
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91663..92757
DNA (1095bp) protein (365aa)
glmS; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
sigma factor regulator FecR n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DF6CBC
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KGI77707.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source=
scnpilot_p_inoc_scaffold_203_82
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92754..93899
DNA (1146bp) protein (382aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1163407 species
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E5_9GAMM
N-acetylglucosamine-6-phosphate deacetylase
scnpilot_p_inoc_scaffold_203_83
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93832..94689)
DNA (858bp) protein (286aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
rluB; pseudouridylate synthase (EC:4.2.1.70)
Ribosomal large subunit pseudouridine synthase B n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T2V9_XANCT
scnpilot_p_inoc_scaffold_203_84
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94820..95941)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003796286
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHX13907.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangninge
scnpilot_p_inoc_scaffold_203_85
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96130..97593)
DNA (1464bp) protein (488aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:EIL89036.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EIL89036.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP95_9GAMM
scnpilot_p_inoc_scaffold_203_86
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97857..98564
DNA (708bp) protein (236aa)
Integral membrane protein TerC n=1 Tax=mine drainage metagenome RepID=T1AQS1_9ZZZZ
Membrane protein {ECO:0000313|EMBL:KGI77413.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane protein
scnpilot_p_inoc_scaffold_203_87
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98583..99122)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12550169 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_203_88
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99157..100008)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK44_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_203_89

Not on your lists

comp(100091..102076)
DNA (1986bp) protein (662aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EQD64105.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
WD40-like beta Propeller containing protein
scnpilot_p_inoc_scaffold_203_90
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102166..104214
DNA (2049bp) protein (683aa)
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:KGI77414.1}; EC=1.3.1.34 {ECO:0000313|EMBL:KGI77414.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
fadH; 2,4-dienoyl-CoA reductase (EC:1.3.1.34)
2,4-dienoyl-CoA reductase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003627083
Displaying items 61-90 of 150 in total

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