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scnpilot_p_inoc_scaffold_989

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_989_1
unknown

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_989_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..1416
DNA (858bp) protein (286aa)
Ferredoxin {ECO:0000313|EMBL:GAN44947.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
Uncharacterized protein id=2974533 bin=GWF1_Xanthomonadales_69_6 species=Acidocella sp. MX-AZ02 genus=Acidocella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DMSO reductase subunit B
scnpilot_p_inoc_scaffold_989_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1413..2351
DNA (939bp) protein (313aa)
DMSO reductase chain C n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRD2_9PROT
DMSO reductase {ECO:0000313|EMBL:GAN44948.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimi
DMSO reductase anchor subunit (DmsC)
scnpilot_p_inoc_scaffold_989_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2458..3300
DNA (843bp) protein (281aa)
Putative salt-induced outer membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE8_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN44949.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
membrane protein
scnpilot_p_inoc_scaffold_989_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3400..4320)
DNA (921bp) protein (307aa)
hydroxymethylbilane synthase (EC:2.5.1.61) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Porphobilinogen deaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI0_9GAMM
porphobilinogen deaminase
scnpilot_p_inoc_scaffold_989_6
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4548..5027
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI76940.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_989_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5078..6949)
DNA (1872bp) protein (624aa)
glycerol acyltransferase n=1 Tax=Dyella japonica RepID=UPI0003176981
Glycerol acyltransferase {ECO:0000313|EMBL:GAN45032.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibac
glycerol acyltransferase
scnpilot_p_inoc_scaffold_989_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7105..8412)
DNA (1308bp) protein (436aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM4_9GAMM
phosphoribosylamine--glycine ligase
scnpilot_p_inoc_scaffold_989_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8446..9801)
DNA (1356bp) protein (452aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM61_9GAMM
AMP-ligase {ECO:0000313|EMBL:GAN45030.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.
acyl-CoA synthetase/AMP-acid ligase
scnpilot_p_inoc_scaffold_989_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9818..10381)
DNA (564bp) protein (188aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852,
Threonylcarbamoyl-AMP synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIL5_9GAMM
putative translation factor (SUA5)
scnpilot_p_inoc_scaffold_989_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10385..12919)
DNA (2535bp) protein (845aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1475481 species="Bacteria; Proteobac
DNA topoisomerase 1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDR1_9GAMM
DNA topoisomerase I
scnpilot_p_inoc_scaffold_989_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..14154)
DNA (1161bp) protein (387aa)
DNA protecting protein DprA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP7_9GAMM rbh
DNA protecting protein DprA {ECO:0000313|EMBL:EIL88138.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
DNA protecting protein DprA
scnpilot_p_inoc_scaffold_989_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14236..15354)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FE939E rbh
peptidoglycan-binding protein
Peptidoglycan-binding protein {ECO:0000313|EMBL:AIF46469.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
scnpilot_p_inoc_scaffold_989_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15556..16059
DNA (504bp) protein (168aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
peptide deformylase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037BB58D
scnpilot_p_inoc_scaffold_989_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16063..17010
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D08D3
methionyl-tRNA formyltransferase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
methionyl-tRNA formyltransferase
scnpilot_p_inoc_scaffold_989_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17007..18305
DNA (1299bp) protein (433aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
16S rRNA methyltransferase n=1 Tax=Dyella japonica RepID=UPI000314F809
16S rRNA methyltransferase
scnpilot_p_inoc_scaffold_989_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18452..20215
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WK54_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGG90756.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
scnpilot_p_inoc_scaffold_989_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20175..21227
DNA (1053bp) protein (351aa)
glycosyl transferase family 1 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4EEE5
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAN45024.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
glycosyltransferase
scnpilot_p_inoc_scaffold_989_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21224..22213
DNA (990bp) protein (330aa)
glycosyl transferase family 1 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4EEE5 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:GAN45024.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
glycosyltransferase
scnpilot_p_inoc_scaffold_989_20
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22408..23313)
DNA (906bp) protein (302aa)
GDP-6-deoxy-D-lyxo-4-hexulose reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B56DA5 rbh
3-beta hydroxysteroid dehydrogenase/isomerase family protein
3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:AIO33587.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkho
scnpilot_p_inoc_scaffold_989_21
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23297..24331)
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1475481 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Pseudomonas moraviensis R28 RepID=V8QZI2_9PSED rbh
gmd; GDP-mannose 4,6-dehydratase
scnpilot_p_inoc_scaffold_989_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24408..25175)
DNA (768bp) protein (256aa)
Lipopolysaccharide core biosynthesis glycosyltransferase n=2 Tax=mine drainage metagenome RepID=T1ATK6_9ZZZZ rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:GAN45021.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc
lipopolysaccharide core biosynthesis glycosyl transferase
scnpilot_p_inoc_scaffold_989_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25277..26377
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E5B513
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46653.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_989_24
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26433..27521
DNA (1089bp) protein (363aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KZN1_FRAAD
ADP-heptose--LPS heptosyltransferase
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AFC87091.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuri
scnpilot_p_inoc_scaffold_989_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27580..29289
DNA (1710bp) protein (570aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCA4_9GAMM rbh
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EIL97095.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
glycosyl transferase
scnpilot_p_inoc_scaffold_989_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29362..29697
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A58D2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX15181.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_989_27
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29716..30102)
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B33903
NODE_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ95958.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
membrane-associated protein in eicosanoid and glutathione metabolism
scnpilot_p_inoc_scaffold_989_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30246..30680)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUF8_PSEUU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27942.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_989_29
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31060..31344
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JL27_9GAMM
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_989_30

Not on your lists

comp(31415..31690)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZL54_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD45187.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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