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scnpilot_p_inoc_scaffold_56_15

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(16721..17179)

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNN8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 155.0
  • Bit_score: 148
  • Evalue 5.80e-33
membrane protein SmpA similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 149.0
  • Bit_score: 154
  • Evalue 2.30e-35
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 149.0
  • Bit_score: 154
  • Evalue 1.10e-34

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGTCCGGAACGATGCGCAAGACGATATCCACCCTCCTGCTCGCTTCTGCCAGCGTGCTGATGCTCGGGGCCTGCAACCCCATTTACCGGCCCGACGTCCAGCAAGGCAACCTGCTGATCGGCAAGAATGTCGGCGAATTGAAGCCCGGTCTCACCAAGCAGCAAGTCGTGGCGCTGCTGGGCTCGCCCTCGGTGGTCAGTCCGTTCAATGCAAACCAGTGGAATTACGTCGCCACCTTGCAGCGCCGCGGCGGCACCATCAAGGAGCGCACCCTGACGTTGTATTTCGACAACGACACGCTGGTGCGCACCGACGGCGACTTCATGAAGGAAACCCCGCAGGAACTGCTGCAGGAGAGCCACAAGTACGGTCCGCTGTATCCGACCAACCTGACCAAGCAGGAAGTGAAGGACTTGGAGAAGAAACAGCAGCAGGGCGGCGGGGACAGCGGAGGGTGA
PROTEIN sequence
Length: 153
MSGTMRKTISTLLLASASVLMLGACNPIYRPDVQQGNLLIGKNVGELKPGLTKQQVVALLGSPSVVSPFNANQWNYVATLQRRGGTIKERTLTLYFDNDTLVRTDGDFMKETPQELLQESHKYGPLYPTNLTKQEVKDLEKKQQQGGGDSGG*