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scnpilot_p_inoc_scaffold_49_66

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(84321..84836)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 168.0
  • Bit_score: 187
  • Evalue 1.30e-44
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 170.0
  • Bit_score: 191
  • Evalue 1.20e-45
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 180
  • Evalue 4.30e-43

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAACGGCGGGCGGCGGGTGCTGCTCGGACGCATCGTGGGTGTGCATGGTGTGCGCGGGGCGGTGAAGCTGGAATCGTTCACCGAACCGCGGTTGGCGATCTTCGGGTACAAGCCCTGGCTGCTGGAACGCGAGCCCGAGCGTTTCGAGGAAATCGCGGAAGCGCAGGGACACGCGCAGGGCAAGGGCATCGTGGCCACATTGCCTAGTGTGGCGGATCGTGATGCGGCGGCCAGCATGATCGGTGCGCGCATCTGGGTTCCCCGCAAGGCATTGCCCGAGCTGGAACCGGGCGAGTTCTACCAGACGGACCTGGAAGGGCTGCAGGTGGTGAACGAGGCGGGCGACGATTTGGGCCGCGTCAGCCACCTGTTCGACAACGGCGCGCACGATGTGATGATGACGCGCGACGCAGCCGGACGCGAACGCCTGATTCCGTACGTGGTGGATGTTTACGTGAAATCGGTTGACCTCGATGCCGGACGCATCGTCGTCGACTGGCATAAAGACGATTGA
PROTEIN sequence
Length: 172
MNGGRRVLLGRIVGVHGVRGAVKLESFTEPRLAIFGYKPWLLEREPERFEEIAEAQGHAQGKGIVATLPSVADRDAAASMIGARIWVPRKALPELEPGEFYQTDLEGLQVVNEAGDDLGRVSHLFDNGAHDVMMTRDAAGRERLIPYVVDVYVKSVDLDAGRIVVDWHKDD*