ggKbase home page

scnpilot_p_inoc_scaffold_49

Search features with annotation key words

Displaying items 61-90 of 644 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_49_61
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77720..78883
DNA (1164bp) protein (388aa)
Putative RND family acriflavine resistance protein A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W093_9GAMM
Putative RND family acriflavine resistance protein A {ECO:0000313|EMBL:EIL92884.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobact
RND family efflux transporter, MFP subunit
scnpilot_p_inoc_scaffold_49_62
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78902..82033
DNA (3132bp) protein (1044aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E782_9GAMM
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:EGV28049.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococc
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_p_inoc_scaffold_49_63
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82144..83016)
DNA (873bp) protein (291aa)
Aldo/keto reductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AA39_STAND
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADH90826.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATC
scnpilot_p_inoc_scaffold_49_64
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(83194..83574)
DNA (381bp) protein (127aa)
50S ribosomal protein L19 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC2_9GAMM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rho
ribosomal protein L19
scnpilot_p_inoc_scaffold_49_65
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83558..84319)
DNA (762bp) protein (254aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=TRMD_XANCB
trmD; tRNA (guanine-N(1)-)-methyltransferase
scnpilot_p_inoc_scaffold_49_66
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84321..84836)
DNA (516bp) protein (172aa)
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter denitrificans RepID=I4WTL0_9GAMM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
16S rRNA processing protein RimM
scnpilot_p_inoc_scaffold_49_67
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(84841..85101)
DNA (261bp) protein (87aa)
30S ribosomal protein S16 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYI6_9GAMM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrim
30S ribosomal protein S16
scnpilot_p_inoc_scaffold_49_68
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(85214..86629)
DNA (1416bp) protein (472aa)
signal recognition particle n=1 Tax=Dyella japonica RepID=UPI0002E355D9
signal recognition particle
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanth
scnpilot_p_inoc_scaffold_49_69
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86718..86951)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDK8_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93647.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
scnpilot_p_inoc_scaffold_49_70
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87033..88541)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B175B rbh
transglutaminase-like enzyme, predicted cysteine protease
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:AGG90473.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
scnpilot_p_inoc_scaffold_49_71

Not on your lists

comp(88538..90424)
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D41E6 rbh
Peptidase M61 domain protein {ECO:0000313|EMBL:EQD76675.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycyl aminopeptidase
scnpilot_p_inoc_scaffold_49_72

Not on your lists

comp(90573..91910)
DNA (1338bp) protein (446aa)
Amino acid/polyamine transporter I n=1 Tax=mine drainage metagenome RepID=T1C3X2_9ZZZZ rbh
Amino acid/polyamine transporter I {ECO:0000313|EMBL:EQD76682.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative permease
scnpilot_p_inoc_scaffold_49_73
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92151..93878
DNA (1728bp) protein (576aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL20_9GAMM rbh
N-acyl-D-aspartate/D-glutamate deacylase
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:AGG90368.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhoda
scnpilot_p_inoc_scaffold_49_74
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93941..94777
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT1_9GAMM
scnpilot_p_inoc_scaffold_49_75
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94900..95769
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003641F99 rbh
aminotransferase class-IV
Aminotransferase class-IV {ECO:0000313|EMBL:BAL22486.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_p_inoc_scaffold_49_76
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96218..99103
DNA (2886bp) protein (962aa)
TonB-denpendent receptor n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003663812
TonB-dependent receptor {ECO:0000313|EMBL:GAN45632.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TonB-dependent receptor
scnpilot_p_inoc_scaffold_49_77
unknown

Not on your lists

comp(99129..99362)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_49_78
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99768..102920
DNA (3153bp) protein (1051aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D76E
outer membrane receptor for ferrienterochelin and colicins Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Oar protein
scnpilot_p_inoc_scaffold_49_79
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103200..104624
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EC024
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:AHX13479.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_49_80
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105066..108056
DNA (2991bp) protein (997aa)
TonB-dependent receptor n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E605_9XANT
TonB-dependent receptor {ECO:0000313|EMBL:ENZ96251.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fraga
TonB-dependent receptor
scnpilot_p_inoc_scaffold_49_81
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108076..108378
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EC024
tetratricopeptide repeat protein,sulfotransferase family protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
sulfotransferase
scnpilot_p_inoc_scaffold_49_82
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

108547..110652
DNA (2106bp) protein (702aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NUH4_9BACT rbh
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:AHM63273.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeov
scnpilot_p_inoc_scaffold_49_83
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110811..111743)
DNA (933bp) protein (311aa)
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4TG46_9MYCO rbh
N-acetylmuramic acid-6-phosphate etherase {ECO:0000313|EMBL:EJO88108.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium comple
N-acetylglucosamine-6-phosphate deacetylase
scnpilot_p_inoc_scaffold_49_84
Streptomyces coelicolor, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111740..112699)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9EWI7_STRCO
SC7H9.09c; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC16518.1}; TaxID=100226 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.;" source="Str
scnpilot_p_inoc_scaffold_49_85
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112766..114106)
DNA (1341bp) protein (447aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7) Tax=RBG_16_Gammaproteobacteria_62_13__curated
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZU7_9GAMM
scnpilot_p_inoc_scaffold_49_86
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114331..115884)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000378DA2F rbh
Sodium:solute symporter {ECO:0000313|EMBL:ETK36966.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
integral membrane transport protein
scnpilot_p_inoc_scaffold_49_87
unknown

Not on your lists

comp(115975..116097)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_49_88
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

116124..117311
DNA (1188bp) protein (396aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Alanine--glyoxylate transaminase {ECO:0000313|EMBL:ACZ41085.1}; EC=2.6.1.44 {ECO:0000313|EMBL:ACZ41085.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC
Alanine--glyoxylate transaminase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDS9_THET1 rbh
scnpilot_p_inoc_scaffold_49_89
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117404..118885
DNA (1482bp) protein (494aa)
Glycolate oxidase, subunit GlcD n=1 Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2N3P5_9PSED rbh
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EJL08422.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
glycolate oxidase subunit GlcD
scnpilot_p_inoc_scaffold_49_90
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118882..119946
DNA (1065bp) protein (355aa)
Glycolate oxidase FAD binding subunit n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BBW3_9GAMM
Glycolate oxidase FAD binding subunit {ECO:0000313|EMBL:BAN68858.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Mo
glcE; glycolate oxidase FAD binding subunit
Displaying items 61-90 of 644 in total

View Taxonomy