ggKbase home page

scnpilot_p_inoc_scaffold_49_89

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 117404..118885

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase, subunit GlcD n=1 Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2N3P5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 491.0
  • Bit_score: 731
  • Evalue 6.70e-208
  • rbh
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EJL08422.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 491.0
  • Bit_score: 731
  • Evalue 9.40e-208
glycolate oxidase subunit GlcD similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 491.0
  • Bit_score: 730
  • Evalue 3.20e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGATCCTCCCTGCCGCCAAACCAACGACCGACAAGCGTGAACTGATCGCCGCGCTGGGTCGGTTCCTGCCCGACGATGCGATCCTGCACGCGACGGAAGACTTGCGTCCCTACGAGTGCGATGGCCTGTCCGCGTTTCGCCAGACACCGATGGTCGTCGTGTTGCCGCGCACCATCGAGCAAGTCCAGAAAATCATGCGTGTGTGCCACGAACGCGGCGCGCCGGTGGTGGCACGCGGCGCCGGCACCGGTTTGTCGGGCGGGGCGTTGCCGTTGGGCGACGGCCTGCTGCTGAGCCTCGCGCGTTTCATGTCGATTCTGGACATCGATCCCGCGAACCGCACGATGCGGGTGCAACCCGGCGTGCGCAATCTCGCCATTTCCGAAGCGGCGGCGCCATTCGGCTTGTATTACGCACCGGACCCTTCTTCGCAGATCGCCTGCACCATCGGCGGCAACGTGGCCGAGAACGCCGGCGGCGTGCACTGCCTCAAGTACGGACTGACCGTCCACAACATCCTCAAGCTGAAACTGGTGACGATGGACGGCGAGCTGCTGACCTTCGGCGCCGATGGGCTGGATGCGCCGGGCTTCGACCTGCTCGCGCTCGCGACCGGATCGGAGGGCATGCTGGGCGTCGTCGTCGAAGTCACCGTCAAGCTGGTGCCGAAACCTGAAACCGCGCGCGTGGTGTTGGCCGCGTTCGACGACGTGGAGCACGCGGGCGCCGCGGTGGGCGCCATCATCGCGGCCGGCTGCGTGCCCGCCGGCCTCGAGATGATGGACAACCCGGCGATCCGCGCCGCCGAGGCCTTCGTCCACAGCGGCTATCCGGTCGACGCCGCGGCGATCCTGCTGTGCGAACTGGACGGCACCGCCGAAGCGGTCGCCGACGACATCGAACGGGTGGAATCGATCATGGCGCGGTGCGGCGCCAGCGCGACGCGGGTGTCGCGCGACGAAGCGGAGCGCGCGAGGTTCTGGGCCGGGCGCAAGATGGCGTTTCCCGCGATGGGCCGGATTTCGCCCGACTACTACTGCACGGACGGCACCATTCCGCGCAAGCACCTGCCGCGCGTGCTGCGACGCATCGAAGCATTGGGGCGCAAGTACGAACTGCCCGTCGCCAATGTGTTCCACGCCGGCGACGGCAACCTGCACCCGATGATCCTGTACGACGCGAACCGGCCGGGCGAACTCGAACGCGTCGAAGGACTCGGCGGCGAGATCCTGAAGTTGTGCGTCGAGGTGGGCGGCACCATCACCGGCGAACACGGCGTCGGCGTCGAGAAGATCAACCAGATGTGTGACCAGTTTTCGTCCGCCGAACTCACGCAGTTCCACGCGATCAAGGCCGCGTTCGATCCGGAAGGCCTGCTCAATCCGGGCAAGGCCGTGCCACTGCTGAAACGATGCGCCGAATACGGCGGGCTGCACGTGCACGGTGGCGAACTGCCATTTCCGGAACTGGAACGATTTTGA
PROTEIN sequence
Length: 494
MILPAAKPTTDKRELIAALGRFLPDDAILHATEDLRPYECDGLSAFRQTPMVVVLPRTIEQVQKIMRVCHERGAPVVARGAGTGLSGGALPLGDGLLLSLARFMSILDIDPANRTMRVQPGVRNLAISEAAAPFGLYYAPDPSSQIACTIGGNVAENAGGVHCLKYGLTVHNILKLKLVTMDGELLTFGADGLDAPGFDLLALATGSEGMLGVVVEVTVKLVPKPETARVVLAAFDDVEHAGAAVGAIIAAGCVPAGLEMMDNPAIRAAEAFVHSGYPVDAAAILLCELDGTAEAVADDIERVESIMARCGASATRVSRDEAERARFWAGRKMAFPAMGRISPDYYCTDGTIPRKHLPRVLRRIEALGRKYELPVANVFHAGDGNLHPMILYDANRPGELERVEGLGGEILKLCVEVGGTITGEHGVGVEKINQMCDQFSSAELTQFHAIKAAFDPEGLLNPGKAVPLLKRCAEYGGLHVHGGELPFPELERF*