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scnpilot_p_inoc_scaffold_40_187

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 214585..215169

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 194.0
  • Bit_score: 325
  • Evalue 4.70e-86
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 194.0
  • Bit_score: 325
  • Evalue 3.40e-86
  • rbh
isopropylmalate isomerase similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 194.0
  • Bit_score: 311
  • Evalue 2.40e-82

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAACCCGTCACCCGCATCCAGTCCCGCACGGCCGTGCTTGCGGACGAGAACATCGACACCGACCGCATCATCCCGGCGCGCTTCCTCACCACCACCACGCGCGAAGGGTTGGGCCGTGTCTGCTTCAACGATTGGCGCTACCGCAGCGATGGCAGCGACGATCCGGCGTTTCCCTTGAATGCGCCCGAAGCACGTGGCTGCGAAATCCTGGTGGCGGGCCGCAACTTCGGCTGCGGCTCCTCGCGCGAACACGCGCCATGGGCGCTGCTGGATTACGGCGTCCGCGCGGTGCTGTCGAGCGAGATCGCGGACATCTTCCGCAACAACGCGCTGAAGAACGGCCTGCTCGCGATCGTGGTCGGCGCCGCCGAACACCGCTGGCTGCTCGATCACCCCGGCGTCGAACTCGCGATCGATGTGTGCGGGCAAACGATCACGCGGCCCGGTGCCGACCCGATCCATTTCGAACTCGAACCCTTCGCGCGCCACTGCCTGCTGGAAGGCGTCGATCAGTTGGGATTCCTGTTGCACCACACCGATGCAATTCGTGAGTTCGAGTCGCGTGTCGAGGAAGCGGCATGA
PROTEIN sequence
Length: 195
MKPVTRIQSRTAVLADENIDTDRIIPARFLTTTTREGLGRVCFNDWRYRSDGSDDPAFPLNAPEARGCEILVAGRNFGCGSSREHAPWALLDYGVRAVLSSEIADIFRNNALKNGLLAIVVGAAEHRWLLDHPGVELAIDVCGQTITRPGADPIHFELEPFARHCLLEGVDQLGFLLHHTDAIREFESRVEEAA*