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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 181-210 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_181
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208015..209172
DNA (1158bp) protein (386aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase; EC=1.1.1.3;; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
Homoserine dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU8_9GAMM rbh
scnpilot_p_inoc_scaffold_40_182
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209208..210158
DNA (951bp) protein (317aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
homoserine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI000380590D rbh
scnpilot_p_inoc_scaffold_40_183
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210155..211531
DNA (1377bp) protein (459aa)
Threonine synthase {ECO:0000313|EMBL:EIL96060.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EIL96060.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rh
Threonine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9B9_9GAMM rbh
threonine synthase
scnpilot_p_inoc_scaffold_40_184
unknown

Not on your lists

comp(211613..211822)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_185
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211932..213173
DNA (1242bp) protein (414aa)
2-isopropylmalate synthase (EC:2.3.3.13) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C4090
scnpilot_p_inoc_scaffold_40_186
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213170..214588
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C4_9GAMM rbh
scnpilot_p_inoc_scaffold_40_187
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214585..215169
DNA (585bp) protein (195aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C5_9GAMM rbh
isopropylmalate isomerase
scnpilot_p_inoc_scaffold_40_188
unknown

Not on your lists

215166..215318
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_189
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215315..216487
DNA (1173bp) protein (391aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX8_9GAMM rbh
3-isopropylmalate dehydrogenase
scnpilot_p_inoc_scaffold_40_190
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216500..218197
DNA (1698bp) protein (566aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX7_9GAMM rbh
scnpilot_p_inoc_scaffold_40_191
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218194..219204
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase n=1 Tax=Dyella japonica RepID=UPI0002D73596 rbh
scnpilot_p_inoc_scaffold_40_192
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219266..219610
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_40_193
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219678..221645
DNA (1968bp) protein (656aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C8_9GAMM rbh
scnpilot_p_inoc_scaffold_40_194
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221666..221980
DNA (315bp) protein (105aa)
Acetolactate synthase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C9_9GAMM
Acetolactate synthase small subunit {ECO:0000313|EMBL:EIL96070.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
acetolactate synthase
scnpilot_p_inoc_scaffold_40_195
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222090..222782)
DNA (693bp) protein (231aa)
Cytochrome c4 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP7_9GAMM
Cytochrome c4 {ECO:0000313|EMBL:EIL98638.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
cytochrome C
scnpilot_p_inoc_scaffold_40_196
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222793..225375)
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89386.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_p_inoc_scaffold_40_197
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225409..226653)
DNA (1245bp) protein (415aa)
Cytochrome C family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP9_9GAMM
Cytochrome C family protein {ECO:0000313|EMBL:EIL98640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
cytochrome C
scnpilot_p_inoc_scaffold_40_198
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226640..227692)
DNA (1053bp) protein (351aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQD1_9GAMM
GTP cyclohydrolase
scnpilot_p_inoc_scaffold_40_199
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227685..228998)
DNA (1314bp) protein (438aa)
Subtilase family serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WT69_9GAMM rbh
subtilisin-like serine protease
Subtilisin-like serine protease {ECO:0000313|EMBL:AGG87821.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
scnpilot_p_inoc_scaffold_40_200
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228995..229627)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT68_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_40_201
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229624..230208)
DNA (585bp) protein (195aa)
RNA polymerase sigma70 n=1 Tax=Dyella japonica RepID=UPI00031DD4C8
RNA polymerase sigma70
RNA polymerase sigma70 {ECO:0000313|EMBL:AIF46950.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_202
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230267..231085)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ0_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_40_203
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231462..232295
DNA (834bp) protein (278aa)
Methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT55_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_p_inoc_scaffold_40_204
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232292..233512
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97297.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
cytosine deaminase-like metal-dependent hydrolase
scnpilot_p_inoc_scaffold_40_205
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233512..234210
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97298.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_p_inoc_scaffold_40_206
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234233..235750
DNA (1518bp) protein (506aa)
radical SAM protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00035FC4F3 rbh
Radical SAM protein {ECO:0000313|EMBL:KJV36810.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis
radical SAM protein
scnpilot_p_inoc_scaffold_40_207
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235753..236892
DNA (1140bp) protein (380aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitr
scnpilot_p_inoc_scaffold_40_208
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236889..237998
DNA (1110bp) protein (370aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitr
scnpilot_p_inoc_scaffold_40_209
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237995..238948
DNA (954bp) protein (318aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAC4_9GAMM rbh
SAM-dependent methlyltransferase
SAM-dependent methlyltransferase {ECO:0000313|EMBL:AHX13432.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
scnpilot_p_inoc_scaffold_40_210
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238945..239772
DNA (828bp) protein (276aa)
ABC-2 type transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1H0_9GAMM rbh
wzm; putative transmembrane ABC transporter; K09690 lipopolysaccharide transport system permease protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ABC-2 type transporter family protein
Displaying items 181-210 of 299 in total

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