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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 151-180 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_151
unknown

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comp(163396..164073)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035F242B
scnpilot_p_inoc_scaffold_40_152
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164235..166763
DNA (2529bp) protein (843aa)
LuxR family transcriptional regulator n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WXT6_9NOCA rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:EME16478.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS
protein kinase
scnpilot_p_inoc_scaffold_40_153
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(166721..168106)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00035D07F2 rbh
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB50831.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
scnpilot_p_inoc_scaffold_40_154
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168271..168951
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA23_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45750.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
membrane protein
scnpilot_p_inoc_scaffold_40_155
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168958..169782)
DNA (825bp) protein (275aa)
GMP synthase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ31_9GAMM
Glutamine amidotransferase {ECO:0000313|EMBL:GAN45747.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiib
GMP synthase family protein
scnpilot_p_inoc_scaffold_40_156
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169978..171678
DNA (1701bp) protein (567aa)
Peptidase M28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYH2_9GAMM rbh
Peptidase M28 {ECO:0000313|EMBL:EIL92263.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2
putative aminopeptidase
scnpilot_p_inoc_scaffold_40_157
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(171796..172092)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003479EAA
pentapeptide MXKDX repeat protein
Pentapeptide MXKDX repeat protein {ECO:0000313|EMBL:AGG88299.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
scnpilot_p_inoc_scaffold_40_158
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172191..172844)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJD6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87327.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_p_inoc_scaffold_40_159
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(172849..173472)
DNA (624bp) protein (208aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA5_9GAMM
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIM03047.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
RNA polymerase, sigma subunit, ECF family
scnpilot_p_inoc_scaffold_40_160
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173635..175362
DNA (1728bp) protein (576aa)
Redoxin domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU1_9GAMM rbh
Redoxin domain-containing protein {ECO:0000313|EMBL:EIL89232.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
cytochrome c biogenesis protein
scnpilot_p_inoc_scaffold_40_161
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175395..176012
DNA (618bp) protein (206aa)
Methionine-R-sulfoxide reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPU2_9GAMM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EIL89233.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
methionine-R-sulfoxide reductase
scnpilot_p_inoc_scaffold_40_162
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176026..177825)
DNA (1800bp) protein (600aa)
type II secretion system protein E n=1 Tax=Dyella japonica RepID=UPI0002D2823A rbh
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AHX15407.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
scnpilot_p_inoc_scaffold_40_163
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177928..178818
DNA (891bp) protein (297aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycyl-tRNA synthetase subunit alpha n=1 Tax=mine drainage metagenome RepID=T1ADX3_9ZZZZ
glycyl-tRNA synthetase
scnpilot_p_inoc_scaffold_40_164
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178811..181012
DNA (2202bp) protein (734aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glycyl-tRNA synthetase subunit beta n=1 Tax=Dyella japonica RepID=UPI000308622B
glycyl-tRNA synthetase subunit beta
scnpilot_p_inoc_scaffold_40_165
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181012..182589
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_40_166
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182586..184175
DNA (1590bp) protein (530aa)
TPR repeat-containing protein n=3 Tax=mine drainage metagenome RepID=T1D9S9_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TPR-repeat-containing protein
scnpilot_p_inoc_scaffold_40_167
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184350..187238)
DNA (2889bp) protein (963aa)
Tonb-dependent outer membrane receptor protein n=2 Tax=mine drainage metagenome RepID=T1D7G9_9ZZZZ rbh
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45742.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibac
hypothetical protein
scnpilot_p_inoc_scaffold_40_168
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

187791..189269
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TPR-repeat-containing protein
scnpilot_p_inoc_scaffold_40_169
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189266..190822
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037816EA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45743.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TPR-repeat-containing protein
scnpilot_p_inoc_scaffold_40_170
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190948..193779)
DNA (2832bp) protein (944aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D8D6 rbh
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45742.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibac
TonB-dependent receptor
scnpilot_p_inoc_scaffold_40_171
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194203..195069
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003469A0C
Uncharacterized protein {ECO:0000313|EMBL:KJV36678.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
scnpilot_p_inoc_scaffold_40_172
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195136..197208)
DNA (2073bp) protein (691aa)
Phospholipase/lecithinase/hemolysin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP6_9GAMM rbh
transporter
Transporter {ECO:0000313|EMBL:AHX15413.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_40_173
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(197411..199348)
DNA (1938bp) protein (646aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA12_9GAMM rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1162282 species="Bacte
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein
scnpilot_p_inoc_scaffold_40_174
unknown

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200000..200200
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_175
Anopheles darlingi, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(200319..201167)
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN61665.1, ECO:0000313|EnsemblMetazoa:ADAC006673-PA}; TaxID=43151 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
scnpilot_p_inoc_scaffold_40_176
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201249..203921)
DNA (2673bp) protein (891aa)
Aminopeptidase N n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGL5_9GAMM rbh
Aminopeptidase N {ECO:0000313|EMBL:EIL98606.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxyd
aminopeptidase N
scnpilot_p_inoc_scaffold_40_177
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203998..204966
DNA (969bp) protein (323aa)
Putative pyridoxal-phosphate dependent enzyme n=2 Tax=Rhodanobacter sp. 115 RepID=I4WSR0_9GAMM rbh
Putative pyridoxal-phosphate dependent enzyme {ECO:0000313|EMBL:EIL96299.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
threonine dehydratase
scnpilot_p_inoc_scaffold_40_178
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204980..206230)
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2R7_THIK1 rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDW92634.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
scnpilot_p_inoc_scaffold_40_179

Not on your lists

206296..207207
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=2 Tax=mine drainage metagenome RepID=T0ZWW4_9ZZZZ rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EQD34445.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_40_180
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207197..207589
DNA (393bp) protein (131aa)
virulence protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A33C0
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein {ECO:0000313|EMBL:EZP47166.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotroph
biphenyl-2,3-diol 1,2-dioxygenase
Displaying items 151-180 of 299 in total

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