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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 271-299 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_271

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320807..322168
DNA (1362bp) protein (454aa)
Membrane protein involved in aromatic hydrocarbon degradation n=2 Tax=mine drainage metagenome RepID=T1CD28_9ZZZZ rbh
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EQD64585.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
membrane protein
scnpilot_p_inoc_scaffold_40_272
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322263..322883)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036E6286
Uncharacterized protein {ECO:0000313|EMBL:EDP66593.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
scnpilot_p_inoc_scaffold_40_273
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322880..326044)
DNA (3165bp) protein (1055aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AGG87449.1}; EC=1.5.1.12 {ECO:0000313|EMBL:AGG87449.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AGG87449.1};; TaxID=666685 species="Bacteria; Pro
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY5_9GAMM
scnpilot_p_inoc_scaffold_40_274
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326119..326691
DNA (573bp) protein (191aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ89_9GAMM
Membrane protein {ECO:0000313|EMBL:GAN45546.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
membrane protein
scnpilot_p_inoc_scaffold_40_275
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326798..327778
DNA (981bp) protein (327aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
Cytochrome c oxidase subunit II n=1 Tax=mine drainage metagenome RepID=T1B824_9ZZZZ
cytochrome C oxidase subunit II
scnpilot_p_inoc_scaffold_40_276
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327830..329440
DNA (1611bp) protein (537aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WHY2_9GAMM
Cytochrome oxidase subunit I {ECO:0000313|EMBL:KGI76686.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimo
cytochrome c oxidase, subunit I
scnpilot_p_inoc_scaffold_40_277
unknown

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329614..329781
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_278
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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329826..330701
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003702BF3
MFS transporter {ECO:0000313|EMBL:KGI76685.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
MFS transporter
scnpilot_p_inoc_scaffold_40_279
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

330836..332653
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003785D91 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46045.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_280
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332692..332916)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D5AD99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46672.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_281
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332983..333729
DNA (747bp) protein (249aa)
Protein, SURF1 family n=2 Tax=mine drainage metagenome RepID=T1A8K9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGI76683.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_40_282
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

333736..334284
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DA0323
Uncharacterized protein {ECO:0000313|EMBL:KGI76682.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_40_283
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334284..335495
DNA (1212bp) protein (404aa)
Cytochrome oxidase assembly protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W308_9GAMM rbh
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:KGI76815.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Ole
cytochrome oxidase assembly protein
scnpilot_p_inoc_scaffold_40_284
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

335553..336473
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ81_9GAMM rbh
protoheme IX farnesyltransferase
scnpilot_p_inoc_scaffold_40_285
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

336527..338719
DNA (2193bp) protein (731aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
diguanylate cyclase Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_40_286
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338727..339731
DNA (1005bp) protein (335aa)
Putative membrane protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WXF8_9BURK rbh
Membrane protein {ECO:0000313|EMBL:KGI77844.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
cytochrome c oxidase caa3 assembly factor family protein
scnpilot_p_inoc_scaffold_40_287
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339680..340135)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Burkholderia thailandensis RepID=N0AJT0_BURTH
Uncharacterized protein {ECO:0000313|EMBL:KGI77845.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_p_inoc_scaffold_40_288
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(340132..340737)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W503_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94544.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_40_289
unknown

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341153..341284
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_290
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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341554..344223
DNA (2670bp) protein (890aa)
Magnesium-transporting ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC1_9GAMM rbh
Magnesium-transporting ATPase {ECO:0000313|EMBL:EIL98862.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
magnesium ABC transporter ATPase
scnpilot_p_inoc_scaffold_40_291
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

344357..344845
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003811349
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_40_292
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

344868..345269
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Z4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94535.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_40_293
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345281..347080)
DNA (1800bp) protein (600aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1379159 species="Bacteria; Proteobacte
DNA primase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHB8_9GAMM rbh
DNA primase
scnpilot_p_inoc_scaffold_40_294
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

347406..348449
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
type VI secretion protein
scnpilot_p_inoc_scaffold_40_295
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348464..349618)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL94007.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
scnpilot_p_inoc_scaffold_40_296
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349620..357200)
DNA (7581bp) protein (2527aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003475C6E rbh
filamentous hemagglutinin Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_40_297
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357214..359187)
DNA (1974bp) protein (658aa)
Hemolysin activator protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX2_9GAMM rbh
Hemolysin activator protein {ECO:0000313|EMBL:EIL91713.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
hemolysin activator protein
scnpilot_p_inoc_scaffold_40_298
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359458..359742)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91714.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
scnpilot_p_inoc_scaffold_40_299
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359739..362141)
DNA (2403bp) protein (801aa)
Protein kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWX4_9GAMM rbh
Protein kinase {ECO:0000313|EMBL:EIL91715.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip
protein kinase
Displaying items 271-299 of 299 in total

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