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scnpilot_p_inoc_scaffold_40

Search features with annotation key words

Displaying items 241-270 of 299 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_40_241
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(282597..283724)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034800D8 rbh
GumN protein {ECO:0000313|EMBL:EIL89125.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.
polysaccharide biosynthesis protein GumN
scnpilot_p_inoc_scaffold_40_242
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283849..286089
DNA (2241bp) protein (747aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:KHD64589.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KHD64589.1};; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
icd; isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA5B4
scnpilot_p_inoc_scaffold_40_243
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(286108..287211)
DNA (1104bp) protein (368aa)
ADP-heptose--LPS heptosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAW1_9GAMM
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:EIL96602.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
ADP-heptose--LPS heptosyltransferase
scnpilot_p_inoc_scaffold_40_244
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(287284..287928)
DNA (645bp) protein (215aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
PAP2 superfamily protein
scnpilot_p_inoc_scaffold_40_245
unknown

Not on your lists

comp(288065..288607)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_246
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288749..289414
DNA (666bp) protein (222aa)
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WXV7_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:GAN45595.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiiba
winged helix family two component transcriptional regulator
scnpilot_p_inoc_scaffold_40_247
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289524..290906
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Histidine kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WB73_9GAMM rbh
histidine kinase
scnpilot_p_inoc_scaffold_40_248

Not on your lists

comp(290925..292298)
DNA (1374bp) protein (458aa)
Leucine aminopeptidase n=3 Tax=mine drainage metagenome RepID=T0YE09_9ZZZZ
Leucine aminopeptidase {ECO:0000313|EMBL:EQD33586.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome C oxidase subunit II
scnpilot_p_inoc_scaffold_40_249
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292347..293669)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344A2F3 rbh
Phosphate ABC transporter periplasmic protein {ECO:0000313|EMBL:EIL98317.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
ABC-type phosphate transport system, periplasmic component
scnpilot_p_inoc_scaffold_40_250
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293860..295245)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C8B72
Heat-shock protein {ECO:0000313|EMBL:GAN45211.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter se
heat-shock protein
scnpilot_p_inoc_scaffold_40_251
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295675..297822
DNA (2148bp) protein (716aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L4_9GAMM rbh
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:EIL95805.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
NrdJa
scnpilot_p_inoc_scaffold_40_252
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298160..298555
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98314.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_p_inoc_scaffold_40_253
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298644..299477
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8L2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95803.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
NrdJb
scnpilot_p_inoc_scaffold_40_254
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299538..299750
DNA (213bp) protein (71aa)
histone H1 Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_40_255
unknown

Not on your lists

comp(299683..300351)
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_40_256
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

300659..301225
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037922C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_p_inoc_scaffold_40_257
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301361..302224)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344F121 rbh
endonuclease
Endonuclease {ECO:0000313|EMBL:AHX14743.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_40_258
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302293..303210)
DNA (918bp) protein (306aa)
Putative metal-dependent hydrolase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJV1_TERRK rbh
Cyclase {ECO:0000313|EMBL:GAN45762.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative metal-dependent hydrolase
scnpilot_p_inoc_scaffold_40_259
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303316..304197)
DNA (882bp) protein (294aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BKL5_9XANT
Beta-lactamase {ECO:0000313|EMBL:KGM57554.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens
zinc-dependent hydrolase
scnpilot_p_inoc_scaffold_40_260
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304230..304547)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382787F
Uncharacterized protein {ECO:0000313|EMBL:GAN45771.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
ycdJ; arylesterase
scnpilot_p_inoc_scaffold_40_261
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304630..305805)
DNA (1176bp) protein (392aa)
ABC transporter sodium permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WHU9_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:KGI78949.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas
ABC transporter permease
scnpilot_p_inoc_scaffold_40_262
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(305802..306536)
DNA (735bp) protein (245aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH99_9GAMM
ABC-type Na+ transport system, ATPase component
Sodium ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL98840.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
scnpilot_p_inoc_scaffold_40_263
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306744..308375)
DNA (1632bp) protein (544aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VL07_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL87898.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp.
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_p_inoc_scaffold_40_264
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308372..308596)
DNA (225bp) protein (75aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NCK0_9GAMM
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:GAN45592.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc
Cro/Cl family transcriptional regulator
scnpilot_p_inoc_scaffold_40_265
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308586..309176)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003816A64
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX15583.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_40_266
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309348..310763
DNA (1416bp) protein (472aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX01_9GAMM rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG87361.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_p_inoc_scaffold_40_267
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

310760..311842
DNA (1083bp) protein (361aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM rbh
RND family efflux transporter, MFP subunit
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_p_inoc_scaffold_40_268
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311940..315008
DNA (3069bp) protein (1023aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC98_9GAMM rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EIL97089.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
cation/multidrug efflux pump
scnpilot_p_inoc_scaffold_40_269
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315132..316952
DNA (1821bp) protein (607aa)
potassium transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034B60F8 rbh
Potassium transporter {ECO:0000313|EMBL:GAN45934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter
Kef-type potassium/proton antiporter, CPA2 family
scnpilot_p_inoc_scaffold_40_270
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317140..320703)
DNA (3564bp) protein (1188aa)
Ankyrin repeat-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB0_9GAMM rbh
Ankyrin repeat-containing protein {ECO:0000313|EMBL:EIL89751.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
ankyrin
Displaying items 241-270 of 299 in total

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