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scnpilot_p_inoc_scaffold_40_237

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(277719..280394)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VW24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 884.0
  • Bit_score: 1124
  • Evalue 0.0
  • rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL91415.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 883.0
  • Bit_score: 1124
  • Evalue 0.0
RNA helicase similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 898.0
  • Bit_score: 922
  • Evalue 1.00e-265

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2676
ATGCCCGCCTACAATGCCGCGATGGATCGCGCCGACTTCCCGATCGCCCCGCTGCTGCCGCGCATCCGCGCGTCGTTGCGCGAACATCCGCGACTGGTGCTGGAAGCGCCGCCGGGCGCAGGCAAGACCACGCAGGTGCCGGCCGCGTTGCTCGACGAAGCCTGGCTGGCGGGCCGCAAGATCGTGGTGCTCGAACCGCGCCGGATCGCGGCGCGCGCGGCGGCGGAGTTCATGGCCGCGCAGCGCGGGGAAGCGGTCGGACAGACGATCGGCTATCGCATCCGTTTCGAGTCACACGTATCCGATGCAACCCGCGTCGAGGTGGTCACCGAGGGCATCCTGACGCGGATGCTGCAGGACGACCCGGAATTGCCGGACGTCGGCGCGATCGTGTTCGACGAATTCCACGAGCGGCATCTGGCCGGTGACCTGGGCGCGGCGCTGGCGCTGGACGTGCAGGCGTCGTTGCGGCCCGAGCTGCGCATCGTGGTGATGTCGGCGACGCTGGAAGGCGAGCGCGTGGCACAATGGTTGAATGCGCCGCTTCTGCGCAGCGAGGGCCGCGCGTTTCCGGTGCGCATCGTATACCCGCCCCCACGGCGCGGGGAGAACGAGCTCGCGCATCTGCGTCGCGTGGTGCTGCAAGCCCTGGACGAAACCGATGGCGACGTGCTGGCGTTCCTGCCGGGGCGGCGCGAGATCGCGCAGGCGCAGCGAATGCTTGCAGCAGCTTTGGATACCAAACAAGCGGTGCGCGCTTTTATCCCTCTCCCTCCGGGAGAGGGTGGCGCGCAGCGCCGGGTGAGGGTCCGGGACCGTGCGCAGGACTCGAACCCTCACCCCAACCCCTCTCCCGGGGGGAGAGGAGATCCAATCGGCGAATTTGAAGTTCTAGTGCTGCACGGAGAGCTTGCGCTGGCCGAACAACAGGCTGCGCTCGCGCCGGGCGAAGCCGGCACGCGCCGCGTGATCCTCGCCACCAACGTTGCCGAATCCTCCATCACGGTGCCGGGCGTGCGTGCGGTGATCGACAGCGGACTCGCGCGCGAGCCGCGTTTCGACCCGAACTCGGGGTTCACGCGGCTTGCCACCGTCAACATTTCGCAAGCATCCGCCGATCAACGCGCCGGGCGCGCGGGCCGACTTGCGCCGGGCAGCGCCTACCGGCTGTGGCCGGAAAGCAAGCGCCTCGAGGCCTCGCGCATGCCGGAGATCATGCAAGCCGAATTGTCGGGACTCGCGCTCGAGCTCGCGGCATGGGGCGTCGGTGCGGATGCCGGAGTGATGCATTGGTTGGATGCGCCGCCGAAGGGTGCGCTGGCCGCCGCCCGCGATCTGCTGCAACGGCTCGGCGCCATCGATGCCGAACTGCGCGTCACGCCGCTGGGCCGCGAGATGCTGCAGCTGGGTGCAAACCCCCGCATGGCCGCCGCCGCACAGCGTGCGCCGGATGCGCTGCGCCCGCTGCTTGCCGACCTGCTCGCACTGGTGGACGCACGCTCACCGCTGCGGGGGGCGTTCAACGATGACTTGCGCGCGCGCGTCGCTGCGTTGCATCGCTGGCGCGACGGCGGCCCACGCGTGGTACGCGACGCGGACAGCGGCGCCCTGTCCGCGATCGAGCAGGCCGCGCGCGGCTGGCGCAAGCGCCTCGGCATTCTGCACGGCGCCAGCGGCACGCCGGATGCGTTGAGCGTGGGCAACCTTTTGTTGCACGCGTTTCCCGATCGCGTGGCGAAACAGGATACGAAGGACCCGCGTCGGTATCTGCTCGCCAACGGTCGCGGCGTGCGCCTGCACGACGACTCCGGCTTGTTCGGGGAACCCTGGCTGGTCGTCACCGAGGCGCGCTTCGATGCGCGCGACAGCCTGGTCCTGGCCGCGGCGCCGTTCGATGCCTCGCTGCTGGAACGCGATTACCCGCAACGCTTCGTGCGCGAACGCGTGGTGAAGCAGAACGCGAACGACGTGGTCGAAGCTTTCGAGGAGCGTCGTTTCGACGCCATCGTGCTGGAGCGCCGCTCTGTTCCCGCGGAAGCGGAGGACACATTGCCCGCGCTGCTGGCGACGATCCGTGCGCGCGGTCTCGCGTCGCTTCCGTGGAGCGATGCGGCGCTGCGCCTGCGCGCGCGGATCGAGTGGCTGCGCCGCGTGATGCCGGAAGCCGGTTTGCCGAACGTCGCCGACGATGCGCTGCTGGCGGCACTGGGAACCTGGCTGGCGCCCGTGCTCGCCGGCAAGCGCAAGCTGGGGGCGCTGTCGTCGGAGGACTTGTCGAATGCACTGGCCGGCCTGCTCGACTGGCCGCAGCGCAAGCTGCTGGAAGAAGCCGCACCCGATGCGCTCGCGATGCCGAGCGGAATGACGCGCAAGCTCGACTACGCGGCGGCAGTGGACGGGGAATCGAACGCGGCGTCGCCGGTGCTCGCGGTGAAACTGCAGGAACTGTTCGGGCTGGCCGAAACCCCGCGCGTCGCCAACGGCCGCGTGCCCGTGATGTTGCACCTGCTCTCGCCCGGCGGTCGCCCGATCCAGGTCACGCAGGACCTGCGCGGCTTCTGGGATCGCACCTATGCCGAAGTGAAAAAGGAATTGAAGGGTCGTTATCCGCGCCATCCATGGCCAGACGATCCATGGAACGCAACACCCACCCATCGCGTCAAACCCCGTCGATGA
PROTEIN sequence
Length: 892
MPAYNAAMDRADFPIAPLLPRIRASLREHPRLVLEAPPGAGKTTQVPAALLDEAWLAGRKIVVLEPRRIAARAAAEFMAAQRGEAVGQTIGYRIRFESHVSDATRVEVVTEGILTRMLQDDPELPDVGAIVFDEFHERHLAGDLGAALALDVQASLRPELRIVVMSATLEGERVAQWLNAPLLRSEGRAFPVRIVYPPPRRGENELAHLRRVVLQALDETDGDVLAFLPGRREIAQAQRMLAAALDTKQAVRAFIPLPPGEGGAQRRVRVRDRAQDSNPHPNPSPGGRGDPIGEFEVLVLHGELALAEQQAALAPGEAGTRRVILATNVAESSITVPGVRAVIDSGLAREPRFDPNSGFTRLATVNISQASADQRAGRAGRLAPGSAYRLWPESKRLEASRMPEIMQAELSGLALELAAWGVGADAGVMHWLDAPPKGALAAARDLLQRLGAIDAELRVTPLGREMLQLGANPRMAAAAQRAPDALRPLLADLLALVDARSPLRGAFNDDLRARVAALHRWRDGGPRVVRDADSGALSAIEQAARGWRKRLGILHGASGTPDALSVGNLLLHAFPDRVAKQDTKDPRRYLLANGRGVRLHDDSGLFGEPWLVVTEARFDARDSLVLAAAPFDASLLERDYPQRFVRERVVKQNANDVVEAFEERRFDAIVLERRSVPAEAEDTLPALLATIRARGLASLPWSDAALRLRARIEWLRRVMPEAGLPNVADDALLAALGTWLAPVLAGKRKLGALSSEDLSNALAGLLDWPQRKLLEEAAPDALAMPSGMTRKLDYAAAVDGESNAASPVLAVKLQELFGLAETPRVANGRVPVMLHLLSPGGRPIQVTQDLRGFWDRTYAEVKKELKGRYPRHPWPDDPWNATPTHRVKPRR*