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scnpilot_p_inoc_scaffold_40_240

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(282005..282583)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 189.0
  • Bit_score: 262
  • Evalue 3.70e-67
ribosomal large subunit pseudouridine synthase E n=1 Tax=Xanthomonas vasicola RepID=UPI0001CBFFB1 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 189.0
  • Bit_score: 262
  • Evalue 2.60e-67
ribosomal large subunit pseudouridine synthase e protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 178.0
  • Bit_score: 260
  • Evalue 4.80e-67

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Taxonomy

Xanthomonas vasicola → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCTCGTCCTCTTCCACAAACCGTTCAACGTGCTGTGCCAGTTCACCGACCGCAGCGCGACGCCGCGACGCACGCTGGCGGAATTCGGCTTGCCGCCGAACGTCTATCCGGCAGGCAGGCTCGACTTCGATTCCGAAGGTTTGTTGCTGCTGACCGACGACGGCGCGCTGGCGCACCGCATCACCGATCCGCGCCACAAGCTGGCGAAAACCTACCTGGCGCAAGTGGAGGGCACGCCGACTGCGACCGCCCTGCAACGCCTGCGCAGCGGGGTCGATCTGAAGGACGGCACCACGCTGCCGGCCGAAGCGCGTCCTCTGGAACGCGCGCCCGAGTGGCTGGGACCGCGCGACCCGCCGGTGCGCTTCCGCAAGACGGTGCCGGATGCATGGATCGAACTGACGATCCGCGAAGGCCGCAACCGCCAGGTGCGGCGCATGACCGCAGCGGTGGGCCTGCCGACGTTGCGGCTGGTGCGCGTCCGGGTCGGTGACTGTTCGCTCGATGATCTCGCACCCGGTGCGCACCGCATCATCGAATCGCAAGCCAGGCGTCATCCACGAGGAACACCGCGATGA
PROTEIN sequence
Length: 193
MLVLFHKPFNVLCQFTDRSATPRRTLAEFGLPPNVYPAGRLDFDSEGLLLLTDDGALAHRITDPRHKLAKTYLAQVEGTPTATALQRLRSGVDLKDGTTLPAEARPLERAPEWLGPRDPPVRFRKTVPDAWIELTIREGRNRQVRRMTAAVGLPTLRLVRVRVGDCSLDDLAPGAHRIIESQARRHPRGTPR*