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scnpilot_p_inoc_scaffold_220_10

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 6627..8540

Top 3 Functional Annotations

Value Algorithm Source
GspD-like type II secretion system secretin protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB4_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 639.0
  • Bit_score: 982
  • Evalue 2.80e-283
  • rbh
Type II and III secretion system protein {ECO:0000313|EMBL:KIA94985.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 639.0
  • Bit_score: 983
  • Evalue 1.80e-283
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 639.0
  • Bit_score: 982
  • Evalue 8.00e-284
  • rbh

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Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1914
ATGTTTAAAAAGACCGTTTTTTTAATTATAAGTTTATTAATCACAGGATTACTGTCGGCTCAGGATATTGAGCTGGAAAAGAAATTTGACGAATTAGCCAAACAGAAAAAAGGACTGAACGAAATTATAAAAATTGATGTTTCAGGCTTAACATTACACGACTTTATTCTCTCCATTGCCGAAGAACATCAGTTGAATGTCAGTGCCGAAAGTGATCTGACCCAATCGGTTGTAAACAACTTTTTCGATGTAACGGTAAAAGACGTGTTCCTTTTCCTGGCGCAGAAATACGATCTGGAAGTTGGTTTTATGAGTAATATCATCACTTTCAAGAAAAGAAAAGAAGTGAAGATCATAGAGCGGAAACAGCCTAAACTGGTCGATGTCAGCTATAACCCTCAGAACGATTTCCTGTCGGTGAAATTGGAAAACGATTCACTGCCGTCTGTTGCGAAGGCGATTATTGATAAATCCAGTAAAAACCTGATCCTGGCACCGGATGTTAAAGGCCTTAAGGTATCTTCCTATATCCTGAACCGCCCGTTCGACCAGGTAATTGAAATGATGGCCAAGTCAAATGATTTACTGGCGACCAAAGATGAAAACGGTTTCTACTTTATTGAAAAAAATAAGGATGCGAATAGCGGTGCTACCGGAAATACTTATGGCAGTAGCGGTCAAAAAACCAAACAGCCCAAAGCATCGGTCGGTGCAGCCGGATATTATGAAGTTGACCTGAATAAAGCCGGATTTTTAACGGTAAAAGCCTATGTTGCCGATGTTTCCGATTTGATTACCGAAGCGGCAGAAAAACTGCATGTAAACTACTTCCTGTACAACAAGCCGGAAAATGAAAAAACAAGTTTGTCGGCAGACAATATCACGTTTGACGACCTGTTGGAACATGTTTTTAAAGGAAAGAAATACATTTACAGAAAACAGGAAAACCTGTATCTGATCGGAGAACACGCTACAGAAGGATTGCGTGCTACAGAACTGATCCCGCTCGAAAACCGTTCCATAGAATCCGTATTGCCGTCATTGCCGAAAACGTTCTCCGAAAAATTAGAGATTAAAGAATTTGTGGAATTAAACGGACTTATCGTTTCCGGTTCCAGAAGCGCTATAGAAGAGCTGAAAGTATACATGAAGCAAATTGATAAAGTGGTTCCTTTGGTTCAGATTGAAGTGATCATTGCGCAGTATAATAAATCATACGACATACAATCCGGGATTAAAGCGGGGATAGACAGTAAAAATATCGCGCAGACAGGCGGTACATTATACCCGTCGGCAGATATGACCGTTAACGGATCTTCCGTTAACAGTTTGATCAATGCCTTTAACGGATTCGGACTTTTTAAACTGGGGAAAGTAACACAGTCGTTTTATATGAACTTGAAATTACTGGAAAACAACTCCATTGTGAAAATTGAGTCCACACCTAAAATCGCAACAATCAGCGGACATGAAGCGAAACTGGCAATAGGGGAAACCAGCTATTATTTTGAACAAAACAACCGATTGCTGACCAATAGTATTGGAAACGATATTTTACAGTCCGGTACGTGGAAATCGACCGATGCAAACCTGAGTGTTTCGATCAAGCCGTTTGTGTCAACAGACGAAAATGTAACGCTGACAATATCTGTGGAAAAAAGTTCTTTCTTAGGTAGAGCGGGCGATACGGCACCTCCGGGTAAGGCAACGCAGAAATTTGAATCCTTGGTGCGAGTGAAAAACAACGAAATGATTTTGTTGGGAGGTCTGGACGAACTGAAAAAAGAAAACTCCGGTTCGGGTGTGCCGTTGCTTTCCCGTATTCCGATCCTGAAATGGTTTTTCAGCAGTAGAAAAAAAGGTAAGAACGATTCGAAGCTGCACATTTTTATTAAACCTACCATTATTTACTAA
PROTEIN sequence
Length: 638
MFKKTVFLIISLLITGLLSAQDIELEKKFDELAKQKKGLNEIIKIDVSGLTLHDFILSIAEEHQLNVSAESDLTQSVVNNFFDVTVKDVFLFLAQKYDLEVGFMSNIITFKKRKEVKIIERKQPKLVDVSYNPQNDFLSVKLENDSLPSVAKAIIDKSSKNLILAPDVKGLKVSSYILNRPFDQVIEMMAKSNDLLATKDENGFYFIEKNKDANSGATGNTYGSSGQKTKQPKASVGAAGYYEVDLNKAGFLTVKAYVADVSDLITEAAEKLHVNYFLYNKPENEKTSLSADNITFDDLLEHVFKGKKYIYRKQENLYLIGEHATEGLRATELIPLENRSIESVLPSLPKTFSEKLEIKEFVELNGLIVSGSRSAIEELKVYMKQIDKVVPLVQIEVIIAQYNKSYDIQSGIKAGIDSKNIAQTGGTLYPSADMTVNGSSVNSLINAFNGFGLFKLGKVTQSFYMNLKLLENNSIVKIESTPKIATISGHEAKLAIGETSYYFEQNNRLLTNSIGNDILQSGTWKSTDANLSVSIKPFVSTDENVTLTISVEKSSFLGRAGDTAPPGKATQKFESLVRVKNNEMILLGGLDELKKENSGSGVPLLSRIPILKWFFSSRKKGKNDSKLHIFIKPTIIY*