ggKbase home page

scnpilot_p_inoc_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_220_1
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC3_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03644.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium john
scnpilot_p_inoc_scaffold_220_2
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

328..1110
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC4_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03645.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_220_3
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1094..2308
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC5_FLAJ1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA97310.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_220_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2283..2630
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC6_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03647.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_220_5
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2593..3108
DNA (516bp) protein (172aa)
GspJ-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC7_FLAJ1
hypothetical protein
GspJ-like type II secretion system protein {ECO:0000313|EMBL:ABQ03648.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_220_6
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3105..4226
DNA (1122bp) protein (374aa)
GspF-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMC8_FLAJ1 rbh
type II secretion system protein rbh
GspF-like type II secretion system protein {ECO:0000313|EMBL:ABQ03649.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_220_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4299..4733
DNA (435bp) protein (145aa)
GspG-like type II secretion system protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB1_FLAJ1
hypothetical protein
GspG-like type II secretion system protein {ECO:0000313|EMBL:ABQ03650.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba
scnpilot_p_inoc_scaffold_220_8
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4741..5223
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB2_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03651.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium john
scnpilot_p_inoc_scaffold_220_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5220..6623
DNA (1404bp) protein (468aa)
GspE-like type II secretion system ATPase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB3_FLAJ1 rbh
type II secretion system protein E
GspE-like type II secretion system ATPase {ECO:0000313|EMBL:ABQ03652.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F
scnpilot_p_inoc_scaffold_220_10
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6627..8540
DNA (1914bp) protein (638aa)
GspD-like type II secretion system secretin protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB4_FLAJ1 rbh
Type II and III secretion system protein {ECO:0000313|EMBL:KIA94985.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F
type II and III secretion system protein rbh
scnpilot_p_inoc_scaffold_220_11
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8540..9730
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB5_FLAJ1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ03654.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="
scnpilot_p_inoc_scaffold_220_12
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9723..10247
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB6_FLAJ1
Uncharacterized protein {ECO:0000313|EMBL:KIA97318.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_220_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10231..11190
DNA (960bp) protein (320aa)
Fibronectin, type III domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB7_FLAJ1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA94982.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
fibronectin, type III domain-containing protein
scnpilot_p_inoc_scaffold_220_14
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11195..11707
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FMB8_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ03657.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium john
scnpilot_p_inoc_scaffold_220_15
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11927..13000)
DNA (1074bp) protein (358aa)
ankyrin n=1 Tax=Pedobacter agri RepID=UPI00029A2CD5 rbh
Ankyrin {ECO:0000313|EMBL:KHL96592.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
ankyrin
scnpilot_p_inoc_scaffold_220_16
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13819..14052)
DNA (234bp) protein (78aa)
hsdM; type I restriction-modification system, M subunit (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PS3_CYTH3
Strain DSM 12611 Contig14, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51606.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
scnpilot_p_inoc_scaffold_220_17
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14604..15293
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6P2_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_220_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15405..19268
DNA (3864bp) protein (1288aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000369EA10 rbh
ATP-binding protein, putative Tax=GWF2_Bacteroidetes_43_11_curated
ATP-binding protein, putative
scnpilot_p_inoc_scaffold_220_19
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19449..20507)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037BDCC3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO85897.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium riv
hypothetical protein
scnpilot_p_inoc_scaffold_220_20
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20774..22396
DNA (1623bp) protein (541aa)
Resolvase, N-terminal domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0Y5_9FLAO rbh
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFK36161.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chry
resolvase domain
scnpilot_p_inoc_scaffold_220_21
unknown

Not on your lists

comp(22484..22795)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_220_22
unknown

Not on your lists

comp(22815..23195)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_220_23
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24064..25005
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KGO89252.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KGO89252.1};; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobact
prsA; Ribose-phosphate diphosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SPK8_9FLAO rbh
scnpilot_p_inoc_scaffold_220_24
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


25036..25647
DNA (612bp) protein (204aa)
RplY protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZJ3_9FLAO rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1341154 s
50S ribosomal protein L25/general stress protein Ctc
scnpilot_p_inoc_scaffold_220_25
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25759..26382
DNA (624bp) protein (208aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; Aminoacyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A1905 rbh
scnpilot_p_inoc_scaffold_220_26
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26422..26937
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KGD68980.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aqu
Uncharacterized protein id=2764111 bin=GWF1_Flavobacteria_32_7 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
scnpilot_p_inoc_scaffold_220_27
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26991..29693)
DNA (2703bp) protein (901aa)
Putative uncharacterized protein id=2764115 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
proprotein convertase, P Tax=GWF1_Flavobacteria_32_7_curated
proprotein convertase, P
scnpilot_p_inoc_scaffold_220_28
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30122..32989
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S802_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU22539.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
peptidase
scnpilot_p_inoc_scaffold_220_29
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33181..35259
DNA (2079bp) protein (693aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S753_9FLAO rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_220_30
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35338..36291
DNA (954bp) protein (318aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1341154 species="Bacteria; Bacteroidet
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RY66_9FLAO rbh
riboflavin biosynthesis protein RibF
Displaying items 1-30 of 175 in total

View Taxonomy