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scnpilot_p_inoc_scaffold_220_82

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 91626..92102

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQZ4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 158.0
  • Bit_score: 286
  • Evalue 1.80e-74
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1341181 species="Bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 158.0
  • Bit_score: 286
  • Evalue 2.60e-74
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 158.0
  • Bit_score: 268
  • Evalue 1.10e-69

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGTAAAGTATCTTATTATACGGCTGAAGGATTGAAAAAATTAAGAGATGAGTTGGATCAGTTAAAAAGCATCGAACGTCCTCGTGCATCGCAGGCAATTGCAGAAGCAAGGGACAAAGGTGACTTATCTGAAAATGCAGAATATGATGCGGCTAAAGAAGCTCAGGGACTTTTGGAACTTAAAATTTCTAAAATGGAAGACGTAGTTGCCAATGCCCGTTTAATTGATGAATCGCAATTGGATGTATCAAAAGTATTGGTACTGTCTACTGTTAAAATAAAAAATCAAACCAACGGAATGGAATTGAAATATACGTTGGTGGCAGAAAGTGAAGCCGATTTAAAAACCGGAAAAATCTCCGTTACCTCACCAATTGGTAAAGGATTGTTAGGGAAATCCGTAGGTGAAATTGCAGAAATTCAGGTACCGAACGGTATTTTGAAATTTGAAGTATTAGAAATTTCCAGAGACTAA
PROTEIN sequence
Length: 159
MSKVSYYTAEGLKKLRDELDQLKSIERPRASQAIAEARDKGDLSENAEYDAAKEAQGLLELKISKMEDVVANARLIDESQLDVSKVLVLSTVKIKNQTNGMELKYTLVAESEADLKTGKISVTSPIGKGLLGKSVGEIAEIQVPNGILKFEVLEISRD*