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scnpilot_p_inoc_scaffold_220_102

Organism: SCNpilot_P_inoc_Flavobacterium_40_86

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(107230..107685)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SWX8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 151.0
  • Bit_score: 293
  • Evalue 1.10e-76
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavoba similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 151.0
  • Bit_score: 293
  • Evalue 2.00e-76
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 151.0
  • Bit_score: 281
  • Evalue 1.20e-73

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Taxonomy

Flavobacterium sp. 316 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 456
GTGAACAATTTAAGCTACAAGACAGTATCAGCTAACAAAGCAACTGCTCAAAAAGAGTGGATCGTTGTGGATGCTGAAGGTCATAACTTAGGTCGTTTTGCTTCAAAAGTAGCAATGCTTTTAAGAGGTAAATACAAGCCAAGTTATACACCGCACGTGGACTGTGGAGATAACGTAATTGTTATCAACGCAGAAAAAATCAACCTAACAGGTAACAAACTTGAGGATAAAACATATATCCGTCACACAGGTTACCCAGGTGGTCAAAGAAGTTTATCTGCTAAAGTAATGCAACAAAAAAATCCTGCATTATTAGTAGAGAAAGCTGTAAAAGGAATGTTACCTAAAAACAAATTGGGTGCAGAATTATTCCGAAATTTAAATGTATATGTAGGTTCTGAGCACAAACATGATGCACAACAACCTAAAACCGTTAACTTAAACGATCTAAAGTAA
PROTEIN sequence
Length: 152
VNNLSYKTVSANKATAQKEWIVVDAEGHNLGRFASKVAMLLRGKYKPSYTPHVDCGDNVIVINAEKINLTGNKLEDKTYIRHTGYPGGQRSLSAKVMQQKNPALLVEKAVKGMLPKNKLGAELFRNLNVYVGSEHKHDAQQPKTVNLNDLK*