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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 211-240 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_211
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235134..235685
DNA (552bp) protein (184aa)
Cytochrome c-type biogenesis protein CcmG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y3J0_9SPHN
Cytochrome c-type biogenesis protein CcmG {ECO:0000313|EMBL:GAD47561.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
periplasmic protein thiol
scnpilot_p_inoc_scaffold_80_212
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235685..236104
DNA (420bp) protein (140aa)
cytochrome C biogenesis protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B55A81
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
cytochrome C biogenesis protein
scnpilot_p_inoc_scaffold_80_213
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236101..236808
DNA (708bp) protein (236aa)
Tetratricopeptide TPR_4 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILM7_9SPHN
Scaffold16, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30909.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
scnpilot_p_inoc_scaffold_80_214
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236914..238836
DNA (1923bp) protein (641aa)
Probable potassium transport system protein kup 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=KUP1_NOVAD rbh
K+ potassium transporter
Probable potassium transport system protein kup 1 {ECO:0000255|HAMAP-Rule:MF_01522}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
scnpilot_p_inoc_scaffold_80_215
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238971..239591
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
sodA; superoxide dismutase (EC:1.15.1.1)
UPI0003D00DE1 related cluster n=1 Tax=unknown RepID=UPI0003D00DE1
scnpilot_p_inoc_scaffold_80_216
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(239826..240461)
DNA (636bp) protein (212aa)
Probable intracellular septation protein A n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCJ2_9SPHN
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
intracellular septation protein A
scnpilot_p_inoc_scaffold_80_217
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240458..241387)
DNA (930bp) protein (310aa)
Signal recognition particle receptor FtsY n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8H9_NOVAD rbh
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria
scnpilot_p_inoc_scaffold_80_218
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241384..242574)
DNA (1191bp) protein (397aa)
Radical SAM methylthiotransferase, MiaB/RimO family n=1 Tax=Novosphingobium sp. AP12 RepID=J3APE5_9SPHN rbh
Radical SAM methylthiotransferase, MiaB/RimO family {ECO:0000313|EMBL:EJL34594.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
2-methylthioadenine synthase
scnpilot_p_inoc_scaffold_80_219
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242571..243383)
DNA (813bp) protein (271aa)
diaminopimelate epimerase (EC:5.1.1.7) rbh
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Sphingomonas sp. LH128 PF3_9SPHN">RepID=J8VPF3_9SPHN rbh
scnpilot_p_inoc_scaffold_80_220
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243425..245122)
DNA (1698bp) protein (566aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8H6_NOVAD
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KHS43293.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_80_221
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245544..247076)
DNA (1533bp) protein (511aa)
Methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG07_9SPHN rbh
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCA93665.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_80_222
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247548..248516
DNA (969bp) protein (323aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thymidylate synthase (EC:2.1.1.45)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3D18E rbh
scnpilot_p_inoc_scaffold_80_223
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248529..249122
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A8J2_9SPHN
Scaffold6, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32100.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
scnpilot_p_inoc_scaffold_80_224
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249605..249820)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EI61_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58803.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_80_225
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249820..250392)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Possible 5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDL3_9SPHN
5-formyltetrahydrofolate cyclo-ligase
scnpilot_p_inoc_scaffold_80_226
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250738..251046)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y326_9SPHN
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobact
hypothetical protein
scnpilot_p_inoc_scaffold_80_227
unknown

Not on your lists

comp(251043..251267)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_228
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251464..253437
DNA (1974bp) protein (658aa)
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9T4_9SPHN rbh
Transketolase {ECO:0000313|EMBL:EGD58658.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrog
scnpilot_p_inoc_scaffold_80_229
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253452..254459
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6W6_NOVAD rbh
scnpilot_p_inoc_scaffold_80_230
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254560..255756
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1096930 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H2T2_9SPHN rbh
scnpilot_p_inoc_scaffold_80_231
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

255893..256804
DNA (912bp) protein (304aa)
fructose-bisphosphate aldolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000310F6A0 rbh
fructose-bisphosphate aldolase
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AJP71884.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
scnpilot_p_inoc_scaffold_80_232
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256873..257565
DNA (693bp) protein (231aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFZ2_9SPHN
scnpilot_p_inoc_scaffold_80_233
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257623..259512
DNA (1890bp) protein (630aa)
peptide transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4A5B3 rbh
Oligopeptide transporter OPT {ECO:0000313|EMBL:KHS48509.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
oligopeptide transporter OPT
scnpilot_p_inoc_scaffold_80_234
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259506..259967)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IJV2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41425.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter
hypothetical protein
scnpilot_p_inoc_scaffold_80_235
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259983..260546
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=EFP_NOVAD rbh
elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
scnpilot_p_inoc_scaffold_80_236
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260549..261385
DNA (837bp) protein (279aa)
Inositol-1-monophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YH31_9SPHN rbh
Inositol-1-monophosphatase {ECO:0000313|EMBL:GAD47315.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
inositol monophosphatase
scnpilot_p_inoc_scaffold_80_237
unknown

Not on your lists

261527..261688
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_238
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261607..262137)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002631E4B
GCN5-like N-acetyltransferase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
acetyltransferase
scnpilot_p_inoc_scaffold_80_239
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(262140..263084)
DNA (945bp) protein (315aa)
Asparaginase/glutaminase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W410_KINRD
asparaginase/glutaminase
Asparaginase/glutaminase {ECO:0000313|EMBL:ABS01549.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC B
scnpilot_p_inoc_scaffold_80_240
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263335..264444
DNA (1110bp) protein (370aa)
hydrogenase (acceptor) (EC:1.12.99.6)
Hydrogenase protein small subunit n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z431_9SPHN rbh
Hydrogenase protein small subunit {ECO:0000313|EMBL:EGD60643.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
Displaying items 211-240 of 577 in total

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