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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 181-210 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_181
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206189..207601
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9W6_9SPHN rbh
scnpilot_p_inoc_scaffold_80_182
unknown

Not on your lists

207750..208145
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_183
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208147..208485)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ18_9SPHN
pilus assembly protein PilZ
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33599.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
scnpilot_p_inoc_scaffold_80_184
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208602..209294)
DNA (693bp) protein (231aa)
Murein hydrolase export regulator, LrgB family protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A1M2_9BRAD
murein hydrolase export regulator, LrgB family protein
Murein hydrolase export regulator, LrgB family protein {ECO:0000313|EMBL:BAM92750.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobi
scnpilot_p_inoc_scaffold_80_185
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209287..209634)
DNA (348bp) protein (116aa)
murein hydrolase transporter LrgA n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B321C3
LrgA family protein {ECO:0000313|EMBL:EHK65624.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitox
LrgA family protein
scnpilot_p_inoc_scaffold_80_186
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209631..210971)
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS3_9SPHN rbh
two-component sensor histidine kinase
scnpilot_p_inoc_scaffold_80_187
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210968..211654)
DNA (687bp) protein (229aa)
Two component transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS2_9SPHN rbh
DNA-binding response regulator {ECO:0000313|EMBL:GAO55611.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
two-component response regulator
scnpilot_p_inoc_scaffold_80_188
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211720..212817
DNA (1098bp) protein (366aa)
RND family efflux transporter MFP subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS1_9SPHN rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EGD58292.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
heavy metal efflux system protein
scnpilot_p_inoc_scaffold_80_189
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212821..215898
DNA (3078bp) protein (1026aa)
CzcA family heavy metal efflux protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS0_9SPHN rbh
CzcA family heavy metal efflux protein {ECO:0000313|EMBL:EGD58293.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
heavy metal efflux system protein
scnpilot_p_inoc_scaffold_80_190
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215891..217129
DNA (1239bp) protein (413aa)
Outer membrane efflux protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAR9_9SPHN
Outer membrane efflux protein {ECO:0000313|EMBL:EGD58294.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
outer membrane efflux protein
scnpilot_p_inoc_scaffold_80_191
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217212..217478
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYQ2_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG50102.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
scnpilot_p_inoc_scaffold_80_192
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217559..218308
DNA (750bp) protein (250aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC91_9SPHN rbh
scnpilot_p_inoc_scaffold_80_193
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218305..219135
DNA (831bp) protein (277aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZC90_9SPHN rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KHS43257.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
CDP-alcohol phosphatidyltransferase
scnpilot_p_inoc_scaffold_80_194
unknown

Not on your lists

comp(219080..219400)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_80_195
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


219824..220579
DNA (756bp) protein (252aa)
30S ribosomal protein S2 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B47E15 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
rpsB; 30S ribosomal protein S2
scnpilot_p_inoc_scaffold_80_196
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220689..221615
DNA (927bp) protein (309aa)
elongation factor Ts n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40138 rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacte
tsf; elongation factor Ts
scnpilot_p_inoc_scaffold_80_197
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221787..222500
DNA (714bp) protein (238aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILK9_9SPHN rbh
scnpilot_p_inoc_scaffold_80_198
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222516..223079
DNA (564bp) protein (188aa)
ribosome recycling factor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6CBCC rbh
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=279238 species="Bacteria;
scnpilot_p_inoc_scaffold_80_199
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223076..223786
DNA (711bp) protein (237aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GW08_9SPHN rbh
scnpilot_p_inoc_scaffold_80_200
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223773..224519
DNA (747bp) protein (249aa)
phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTT6_9SPHN
Scaffold16, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30938.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_80_201
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224520..225674
DNA (1155bp) protein (385aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILL3_9SPHN rbh
scnpilot_p_inoc_scaffold_80_202
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225678..226799
DNA (1122bp) protein (374aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Site-2 protease, Metallo peptidase, MEROPS family M50B n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8K3_NOVAD
peptidase RseP
scnpilot_p_inoc_scaffold_80_203
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227054..229807
DNA (2754bp) protein (918aa)
Outer membrane protein assembly factor BamA n=1 Tax=Novosphingobium sp. AP12 RepID=J3ANF5_9SPHN rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; S
surface antigen (D15)
scnpilot_p_inoc_scaffold_80_204
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229807..230487
DNA (681bp) protein (227aa)
Outer membrane protein (OmpH-like) n=1 Tax=Novosphingobium sp. AP12 RepID=J2GW02_9SPHN
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:EJL34610.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi
hypothetical protein
scnpilot_p_inoc_scaffold_80_205
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230508..230987
DNA (480bp) protein (160aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000313|EMBL:AKH41881.1}; EC=4.2.1.59 {ECO:0000313|EMBL:AKH41881.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; S
3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHW3_9SPHN
scnpilot_p_inoc_scaffold_80_206
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


231079..231312
DNA (234bp) protein (78aa)
50S ribosomal protein L31 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BAEF
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rpmE; ribosomal protein L31
scnpilot_p_inoc_scaffold_80_207
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231770..232528
DNA (759bp) protein (253aa)
Heme exporter protein C n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWH1_9SPHN rbh
Heme ABC transporter permease {ECO:0000313|EMBL:KHK91075.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
heme exporter protein C
scnpilot_p_inoc_scaffold_80_208
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232528..232668
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC62864.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_p_inoc_scaffold_80_209
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232669..233115
DNA (447bp) protein (149aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Sphingomonas sp. LH128 RepID=J8VP48_9SPHN
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome C biogenesis protein CcmE
scnpilot_p_inoc_scaffold_80_210
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233128..235137
DNA (2010bp) protein (670aa)
Cytochrome c assembly protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WBL1_9SPHN rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:EIZ77551.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
cytochrome c assembly protein
Displaying items 181-210 of 577 in total

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