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scnpilot_p_inoc_scaffold_80_187

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(210968..211654)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 218.0
  • Bit_score: 318
  • Evalue 4.80e-84
  • rbh
DNA-binding response regulator {ECO:0000313|EMBL:GAO55611.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 217.0
  • Bit_score: 347
  • Evalue 1.40e-92
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 218.0
  • Bit_score: 212
  • Evalue 1.00e-52

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAACATACAGACATGGGGACTCGCGGCTTGCGGCTGTTGTTGATCGAGGATGACGGCGAATTGGCAAGCCGCCTGAGCAATCGCCTGCGCGATGCGGGCTTTGCCGTGGATGTCGCCGGGTCGCAGGCCGATGGCGAAGGCTGGCCCGATCTGGACAAGATCGCCGCGATCATCCTCGACCTTGGCCTGCCCGACGGCAATGGGCTGGATCTGCTGCGCTATTGGCGCGCGCGGCGGGTCGATTGCCCGGTGCTGATCCTGACCGCGCGGGGAAGCTGGCAGGACAAGGTCGAAGGGTTGAACGCCGGAGCCGATGATTTCGTGGTGAAACCGGTGCGGTTTGAGGAATTGCTGGCGCGGCTCCATGCGCTGCTGCGCCGCCACAGCGGCCAGCGCGCGCAATGGATCGAGGCGGGCGGCGTGCGGCTCGATCCGGTGGGGCGCAATGCCGAGGTGGATGGGGAGGCTCTGGCGCTGTCCAAACAGGAATTCCGCCTGCTGCAACTCTTCGTCCGCCGCCCCGGACAGGTGCTCTCGCAAGGCGACATTCTCGAACATCTCTATGACCTTGACGCCCAGCGCGACCTGAACGCCATCGAAGTCTTGGTCAGCCGTTTGCGGCGCAAGGTGGGCGCGGCGCGGATCAAGACCCTGCGCGGGCTTGGCTACAGGTTTGAGGCATGA
PROTEIN sequence
Length: 229
MKHTDMGTRGLRLLLIEDDGELASRLSNRLRDAGFAVDVAGSQADGEGWPDLDKIAAIILDLGLPDGNGLDLLRYWRARRVDCPVLILTARGSWQDKVEGLNAGADDFVVKPVRFEELLARLHALLRRHSGQRAQWIEAGGVRLDPVGRNAEVDGEALALSKQEFRLLQLFVRRPGQVLSQGDILEHLYDLDAQRDLNAIEVLVSRLRRKVGAARIKTLRGLGYRFEA*