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scnpilot_p_inoc_scaffold_80_188

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 211720..212817

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAS1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 355.0
  • Bit_score: 382
  • Evalue 4.30e-103
  • rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EGD58292.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 355.0
  • Bit_score: 382
  • Evalue 6.10e-103
heavy metal efflux system protein similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 367.0
  • Bit_score: 227
  • Evalue 6.60e-57

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGATGCGCAAAAACTCCCTGTTGGCCGCTGGTGCCGCACTCGCCCTGCTTTCCGCCTGTTCGCGTAGCGCCGAAGAGGCCGCGCCCGAAGCGCCCAGCCCCAAGGGCGATCTGGTCGCGCTCAGCGATGCGCAGGTCAAGGAACTGGGCATTACGGTCGAGCCCGCGCAGGGCGATGCGCCGATCCCGCTGGCCAGCGTGCCGGGCACGGTGTCCTTGCCGCCCGAGGCGCGGGTGGCGGTGACGTCTCCTTTTGGCGGCACGGCGGTCAAGGTGCTGGTGATTCCGGGGCAGGAGGTGGCGCGCGGCGCGGTGCTGGGCGTGGTCAAGGCGGCCGAATCGGTGCAGTTCAGCGGGGCGATGGCGCGTTCGCAGGCCGAATTGCCCGTGGCGCAGGCCAATGCCGCCCGTCTCAGCCAATTGGCCAAGGAAGGCGTGATCGCCCCCTCGCGCGCCGAAGAAGCGGTGGCCAATCTGCGCGCGGTTCAGGCCACGCTGGCGGAAAACCGGCGTCTGCTGGCGCTGGGCGGCGCCTCGCGCGACGGCACGGTGACTTTGCGCTCGCCCATCGCGGGCCGCGTGGCCAGCGTCAGCGTGGAAACCGGCGGCGCGGTCAGCACCGATGGCGCGCCCTTTGTGGTGGAAAATATCGCGGCGCTGCGGCTTGATCTGCAATTGCCGCAAAGGCTGGCGGGGCAATTGCGCCCCGGCATGCCGGTGGCGGTGGAGCAGGACGGGCGACGCGTGACGGGCAAATTGCTCTCCGTGGGCGCCTCGCTCGACCCGGTCACGCGTTCTCTGGTCGCGCGGGCCAGCGTGGCGGGCGATGCGGGGCTGGTGCCGGGCAAGGGCGTGACGGCGATCATCGAGGCAGCAGGCGAAACGACCAAGGGCGTCAGCGTTCCGCGCACGGCGGTGGCCAATGTCGATGGCAAAGATGTGGTCTTTGTCCGCGACGGCAAGAATTTCCGCCGTCAGGTGGTCAAGGTCGCGGGCGAAAGCAGCGGGCGGATGGTGATCGGCAGCGGGCTGGACGCCCATGCGCAGGTGGTCACCAAGGGCGTGGCCGAACTCAAAGCCATTTTCGCAGGGGCCTGA
PROTEIN sequence
Length: 366
MMRKNSLLAAGAALALLSACSRSAEEAAPEAPSPKGDLVALSDAQVKELGITVEPAQGDAPIPLASVPGTVSLPPEARVAVTSPFGGTAVKVLVIPGQEVARGAVLGVVKAAESVQFSGAMARSQAELPVAQANAARLSQLAKEGVIAPSRAEEAVANLRAVQATLAENRRLLALGGASRDGTVTLRSPIAGRVASVSVETGGAVSTDGAPFVVENIAALRLDLQLPQRLAGQLRPGMPVAVEQDGRRVTGKLLSVGASLDPVTRSLVARASVAGDAGLVPGKGVTAIIEAAGETTKGVSVPRTAVANVDGKDVVFVRDGKNFRRQVVKVAGESSGRMVIGSGLDAHAQVVTKGVAELKAIFAGA*