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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 151-180 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_151
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175900..176322)
DNA (423bp) protein (141aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EXI1_SPHCR
Glutathione-dependent formaldehyde-activating protein {ECO:0000313|EMBL:KHS49047.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
glutathione-dependent formaldehyde-activating protein
scnpilot_p_inoc_scaffold_80_152
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176319..177401)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037CA8D8
Acyltransferase 3 {ECO:0000313|EMBL:EZP52345.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT
acyltransferase
scnpilot_p_inoc_scaffold_80_153
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177401..179398)
DNA (1998bp) protein (666aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1630648 species="Ba
topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9E4_9SPHN rbh
scnpilot_p_inoc_scaffold_80_154
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179466..180629)
DNA (1164bp) protein (388aa)
ABC transporter substrate-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6620D rbh
ABC transporter substrate-binding protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_80_155
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180681..181508
DNA (828bp) protein (276aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C810_9SPHN
hypothetical protein
scnpilot_p_inoc_scaffold_80_156
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181505..181876
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D36739
endonuclease
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_p_inoc_scaffold_80_157
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181925..182926
DNA (1002bp) protein (334aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
Glutathione synthetase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ44_9SPHN rbh
glutathione synthetase
scnpilot_p_inoc_scaffold_80_158
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182926..184008
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6872D
Scaffold19, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30643.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
acyltransferase
scnpilot_p_inoc_scaffold_80_159
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184021..184941)
DNA (921bp) protein (307aa)
Tyrosine recombinase XerC n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A498_9SPHN
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
recombinase XerC
scnpilot_p_inoc_scaffold_80_160
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184938..186086)
DNA (1149bp) protein (383aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCA93343.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CCA93343.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPJ1_9SPHN
scnpilot_p_inoc_scaffold_80_161
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186131..186676
DNA (546bp) protein (182aa)
Putative deoxyribonucleotide triphosphate pyrophosphatase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCA7_9SPHN
Putative deoxyribonucleotide triphosphate pyrophosphatase {ECO:0000313|EMBL:EAQ30167.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Eryt
serine protease
scnpilot_p_inoc_scaffold_80_162
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(186940..187560)
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000313|EMBL:AKH41574.1}; EC=3.6.1.19 {ECO:0000313|EMBL:AKH41574.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal
nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HRB4_9SPHN
scnpilot_p_inoc_scaffold_80_163
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187618..188334)
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZW27_9SPHN rbh
scnpilot_p_inoc_scaffold_80_164
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188494..189561
DNA (1068bp) protein (356aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Sphingomonas sp. LH128 RepID=J8VR67_9SPHN
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
heat-inducible transcriptional repressor
scnpilot_p_inoc_scaffold_80_165
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189581..190096
DNA (516bp) protein (172aa)
Protein GrpE n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JAG3_9SPHN
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria;
molecular chaperone GrpE
scnpilot_p_inoc_scaffold_80_166
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190170..190430
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46715
Uncharacterized protein {ECO:0000313|EMBL:KHS49013.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_80_167
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190515..191021)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VAM5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU09887.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
scnpilot_p_inoc_scaffold_80_168
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191413..193317
DNA (1905bp) protein (635aa)
Chaperone protein DnaK n=2 Tax=Novosphingobium RepID=F6IPJ8_9SPHN rbh
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
scnpilot_p_inoc_scaffold_80_169
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

193378..194511
DNA (1134bp) protein (378aa)
molecular chaperone DnaJ n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4393B rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
molecular chaperone DnaJ
scnpilot_p_inoc_scaffold_80_170
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194798..196174
DNA (1377bp) protein (459aa)
DNA repair protein radA n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WIH8_9SPHN rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
DNA repair protein RadA
scnpilot_p_inoc_scaffold_80_171
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196187..196780
DNA (594bp) protein (198aa)
Colicin V production protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L6H4_9SPHN
Colicin V production protein {ECO:0000313|EMBL:EIZ80039.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
colicin V production protein
scnpilot_p_inoc_scaffold_80_172
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196821..197228
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I3C1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB18898.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_80_173
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197329..197910
DNA (582bp) protein (194aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPD1_9SPHN
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:KHK91488.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
polyhydroxyalkanoate synthesis repressor PhaR
scnpilot_p_inoc_scaffold_80_174
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


198041..199603
DNA (1563bp) protein (521aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=158500 species="Bacteria; Proteo
Proline--tRNA ligase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VR56_9SPHN rbh
prolyl-tRNA synthetase rbh
scnpilot_p_inoc_scaffold_80_175
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199603..200022
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBM6_9ENTR
hypothetical protein
Scaffold38, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30038.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_80_176
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200067..201374
DNA (1308bp) protein (436aa)
Peptidase M28 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPK9_9SPHN rbh
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:CCA93361.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP
scnpilot_p_inoc_scaffold_80_177
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201413..203746
DNA (2334bp) protein (778aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=983920 species="Bacteria; Proteobacteria; Alph
ribonuclease R (EC:3.1.13.1)
ribonuclease R n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000374648D
scnpilot_p_inoc_scaffold_80_178
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203743..204213)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPL1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93363.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_p_inoc_scaffold_80_179
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204506..205792
DNA (1287bp) protein (429aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaprote
dihydrolipoamide acetyltransferase, long form (EC:2.3.1.61)
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A284C6 rbh
scnpilot_p_inoc_scaffold_80_180
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205794..206183
DNA (390bp) protein (130aa)
Acyl-CoA thioesterase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VH59_9SPHN
Acyl-CoA thioesterase {ECO:0000313|EMBL:EZP85019.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
acyl-CoA thioester hydrolase
Displaying items 151-180 of 577 in total

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