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scnpilot_p_inoc_scaffold_80_177

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 201413..203746

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=983920 species="Bacteria; Proteobacteria; Alph similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 772.0
  • Bit_score: 1134
  • Evalue 0.0
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 767.0
  • Bit_score: 1129
  • Evalue 0.0
ribonuclease R n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000374648D similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 771.0
  • Bit_score: 1136
  • Evalue 0.0

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2334
ATGGCCTTTGACAAACGACCCCCGCGCAAACCCGGCAAACTTTCCGTCCGCAAGATGGAGCCGGGCATGCCCACCCGCCAGCAGGTGCTGGACTTTATCGCCAACGCCACCGACGAGGTGGGCAAGCGTGAGATTGCCAAGGCCTTTGGTCTGAAGGGCGCGGAGAAGATCGAACTGAAGGCGCTGCTCAAGGACATGGCCGAGGAGGGCCTGATCGACGGCAAGCGCACCGCCTATCACCGCATGGGCGGCGTGCCCAAGGTGACCGTGCTGCGCGTGGTGGGGGTCGAGGATGGCCTGCCGATTGCGGTGCCCGACAAGTGGGAGCCGGACGATGCGGGCGCTCCGCCGCGCCTGACCGTGGTGGAACAGCGCGTGGCCCAGAAGAAGGGGCCGCAGATGCGCGGCGTGGGCGCGCTCAAGCCCGGCGACCGGATTTTGAGCCGCACCGAGGAAACGACCGAAGGCTGGCTGGCCTTTCCGATGAAGAAGTTGCCCAATGATGCCGAGGGCATCATGGGCGTGGTCGAGATCGACGGCGCGGGCAAAGGCTGGCTGGCCCCCATCGACAAGCGCGAGCGCCATGCGGTGCAGATCTCCGATCTGGGCGGAGCGGTCGAGGGTCAATTGGTCATGGCCGAACCGGCCGGGCGCAGCCCGCGCGCGGGTGCGCGCGTGGTGGCCGTGCTGGGCGATCCGCTGGCGCCCAAGAGCTTCAGCCTGATCGCGATCCACAAGCATGGCCTGCCGCATATCTTCTCCAGCGAGGTGATCGCCGAGGCCGAACTGTCGGCGCGCCAGGCGCTGAGTCAGGAGCAGCGCGAGGATCTGACTCATCTGCCCATCGTGGCCATCGACCCGGTGGACGCGCGCGACCATGACGATGCGATCTGGGCCGAACCCGATGGTGAGGGCGGTTGGCGCGCGGTGGTGGCGATTGCCGACGTCTCCTTCTATGTCCGCCCCGGCGGCGCGCTGGACCGCGAGGCTCGCAAGCGCGGCAATTCGGTCTATTTCCCCGACCGCGTGGTGCCGATGCTGCCTGAGGTGCTTTCGGCGGACGTTTGCTCGCTCAAGGCCGGCGCTCCGCGCGCGGCCATGGCCTGCCATCTGACCTTTGATGCCGAAGGGCGGATGACCTCCTTCCGCTTTACCCGCGCGATTGTGCGGATCGCCGAAGTGATCGCCTATGAGGAGGCCCAGCGCCGCATCGACGAGAGCGAGGCCGAGGCGCATCTGGTCAACCTGTGGGGCGCTTGGAAGGCGTTGACCAAGGCGCGCGAAAGCCGCGACCCGCTCGAACTCGATCTGCCCGAGCGCCGCGTGGTGCTGGACGAGATGGGCCGGGTGGCTTCGGTGGCGGTGCGCGAAAGGCTGGACGCGCATCGCGTGGTCGAGGATTTCATGATCGCGGCCAATGTCGCGGCGGCCAAAGCGCTGGAAAGCAAGGCCGCCCCGGTGGTCTATCGCATCCACGAGCCGCCAAACCGCGAAAAGCTGATCGCGCTCAAGGATTACCTCGCCACGTTCGAGCGCAAGCTGGCGCTGGGGCAGGTGATCACGCCCGCGCTGTTCAACCGGATGCTGAAAAGCATTGATGATGAGATCGAAAAGGCTCTCATCATGGAGGCGGTGCTGCGCAGCCAGACGCAGGCCTATTATGGCCCGCGCAATGCCGGGCACTTTGGGCTGGGGCTGGGGTCCTATGCCCATTTCACCTCGCCCATCCGCCGCTATTCGGATTTGCTGGTTCATCGCGCGCTGGTCGATGCGTTCCATCTGGAGCAGCCCGCGCCATCGAGCGATCTGCCCGCGCTCTCGGGCCTGCATGGACGGGATCGTTCGGATCTGGCGCGGATCTGCGATGCGATTTCGACTGCCGAACGCCGCGCCATGGTGGCCGAGCGCGAGACGGTGGACCGCTATGTCGCGGCATGGCTCTCGATGCATGTGGGCGAAATGTTTGATTGCCGGATCACCGGGGTCCAGCGTTTCGGCCTGTTTGCCACGATCATCGGGCTGGGCGGCGATGGATTGGTGCCGGTCTCTGTGCTGGGCGACGAGAGGTTCCACCATGATGAAAAGGGCCAGCGGATGGTGGGTGAATCCACCGGCACGGTCTTTGCCATCGGCGATCGGGTCCGCCTGCGTCTGGCCGAGGCCAATGCGCTGACGGGCGCGTTGAAGTTCGAGCCGGAGGAAGGGCAGGGCCGGATCGAGAAGCGGGGCGGTGTGCCTCTGCCGGACAAGGCCGGGCTGAAGCGGCGCGGCAGCCATCTGGTGGGCCATCGCGGGCGACCCGCCAATATCCGCCATCAGGGCAAAAGGCGTTAA
PROTEIN sequence
Length: 778
MAFDKRPPRKPGKLSVRKMEPGMPTRQQVLDFIANATDEVGKREIAKAFGLKGAEKIELKALLKDMAEEGLIDGKRTAYHRMGGVPKVTVLRVVGVEDGLPIAVPDKWEPDDAGAPPRLTVVEQRVAQKKGPQMRGVGALKPGDRILSRTEETTEGWLAFPMKKLPNDAEGIMGVVEIDGAGKGWLAPIDKRERHAVQISDLGGAVEGQLVMAEPAGRSPRAGARVVAVLGDPLAPKSFSLIAIHKHGLPHIFSSEVIAEAELSARQALSQEQREDLTHLPIVAIDPVDARDHDDAIWAEPDGEGGWRAVVAIADVSFYVRPGGALDREARKRGNSVYFPDRVVPMLPEVLSADVCSLKAGAPRAAMACHLTFDAEGRMTSFRFTRAIVRIAEVIAYEEAQRRIDESEAEAHLVNLWGAWKALTKARESRDPLELDLPERRVVLDEMGRVASVAVRERLDAHRVVEDFMIAANVAAAKALESKAAPVVYRIHEPPNREKLIALKDYLATFERKLALGQVITPALFNRMLKSIDDEIEKALIMEAVLRSQTQAYYGPRNAGHFGLGLGSYAHFTSPIRRYSDLLVHRALVDAFHLEQPAPSSDLPALSGLHGRDRSDLARICDAISTAERRAMVAERETVDRYVAAWLSMHVGEMFDCRITGVQRFGLFATIIGLGGDGLVPVSVLGDERFHHDEKGQRMVGESTGTVFAIGDRVRLRLAEANALTGALKFEPEEGQGRIEKRGGVPLPDKAGLKRRGSHLVGHRGRPANIRHQGKRR*