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scnpilot_p_inoc_scaffold_80

Search features with annotation key words

Displaying items 121-150 of 577 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_80_121
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142265..143548)
DNA (1284bp) protein (428aa)
3,4-dihydroxy 2-butanone 4-phosphate synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6Q1_9SPHN rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy 2-butanone 4-phosphate synthase {ECO:0000313|EMBL:EHJ62947.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
scnpilot_p_inoc_scaffold_80_122
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143592..144617)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J442_9SPHN
Acyltransferase 3 {ECO:0000313|EMBL:KEZ19951.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae
acyltransferase 3
scnpilot_p_inoc_scaffold_80_123
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145052..146170)
DNA (1119bp) protein (373aa)
Rod shape-determining protein RodA n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z905_9SPHN rbh
Rod shape-determining protein RodA {ECO:0000313|EMBL:EGD58834.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
rod shape-determining protein RodA
scnpilot_p_inoc_scaffold_80_124
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146167..148257)
DNA (2091bp) protein (697aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z906_9SPHN rbh
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EGD58833.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
scnpilot_p_inoc_scaffold_80_125
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148257..148802)
DNA (546bp) protein (182aa)
Rod shape-determining protein MreD n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WBH3_9SPHN
Rod shape-determining protein MreD {ECO:0000313|EMBL:EIZ77488.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
rod shape-determining protein MreD
scnpilot_p_inoc_scaffold_80_126
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148803..149786)
DNA (984bp) protein (328aa)
Cell shape-determining protein MreC n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A4D7_9SPHN
Rod shape-determining protein MreC {ECO:0000313|EMBL:KHK91326.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
rod shape-determining protein MreC
scnpilot_p_inoc_scaffold_80_127
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149865..150911)
DNA (1047bp) protein (349aa)
rod shape-determining protein MreB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B77A23 rbh
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:EQB18847.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_80_128
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151193..153007
DNA (1815bp) protein (605aa)
DNA mismatch repair protein MutL n=1 Tax=Novosphingobium sp. PP1Y PF6_9SPHN">RepID=F6IPF6_9SPHN rbh
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
scnpilot_p_inoc_scaffold_80_129
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153011..154252)
DNA (1242bp) protein (414aa)
Type I phosphodiesterase / nucleotide pyrophosphatase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X317_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00064.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
phosphodiesterase
scnpilot_p_inoc_scaffold_80_130
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154290..154769)
DNA (480bp) protein (160aa)
Putative MaoC-like dehydratase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZW63_9SPHN
MaoC-like dehydratase Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
MaoC-like dehydratase
scnpilot_p_inoc_scaffold_80_131
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154769..155869)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z912_9SPHN rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
ychF; GTP-dependent nucleic acid-binding protein EngD
scnpilot_p_inoc_scaffold_80_132
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156007..157224)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YVC2_BURA4
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AJY42289.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 200
scnpilot_p_inoc_scaffold_80_133
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157368..157934)
DNA (567bp) protein (189aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED95 rbh
peptidyl-tRNA hydrolase
scnpilot_p_inoc_scaffold_80_134
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(158042..158335)
DNA (294bp) protein (98aa)
50S ribosomal protein L25 n=2 Tax=Novosphingobium RepID=F6IPG3_9SPHN
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=702113 sp
scnpilot_p_inoc_scaffold_80_135
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158449..159321)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPG4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHK91318.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_80_136
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159321..160271)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WBI2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56449.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_80_137
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160437..161351
DNA (915bp) protein (305aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycine--tRNA ligase alpha subunit n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9KZW3_9SPHN rbh
glycyl-tRNA synthetase subunit alpha
scnpilot_p_inoc_scaffold_80_138
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161318..163402
DNA (2085bp) protein (695aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glycine--tRNA ligase (EC:6.1.1.14)
glycyl-tRNA synthetase subunit beta n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000366B4C7 rbh
scnpilot_p_inoc_scaffold_80_139
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163453..166116
DNA (2664bp) protein (888aa)
Pyruvate,phosphate dikinase {ECO:0000313|EMBL:GAO56446.1}; EC=2.7.9.1 {ECO:0000313|EMBL:GAO56446.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6H4_NOVAD rbh
scnpilot_p_inoc_scaffold_80_140
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166337..167104)
DNA (768bp) protein (256aa)
Methyltransferase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I0M7_9SPHN rbh
Methyltransferase {ECO:0000313|EMBL:EQB18862.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium l
hypothetical protein
scnpilot_p_inoc_scaffold_80_141
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167188..167931
DNA (744bp) protein (248aa)
Phosphoribosyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPH0_9SPHN rbh
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:CCA93322.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
scnpilot_p_inoc_scaffold_80_142
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168290..168661
DNA (372bp) protein (124aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9KZW7_9SPHN
phosphoribosyl-AMP cyclohydrolase
scnpilot_p_inoc_scaffold_80_143
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168673..169374)
DNA (702bp) protein (234aa)
Dienelactone hydrolase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPH2_9SPHN rbh
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:CCA93324.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_p_inoc_scaffold_80_144
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169377..170627)
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6I2_NOVAD rbh
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD26541.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_p_inoc_scaffold_80_145
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170735..171079)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9D4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58808.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_80_146
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171185..172414)
DNA (1230bp) protein (410aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02006}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02006};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02006}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYY_NOVAD rbh
scnpilot_p_inoc_scaffold_80_147
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172460..172993
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6I5_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49058.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_p_inoc_scaffold_80_148
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172990..174213
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLP4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD49595.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_p_inoc_scaffold_80_149
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174207..175088)
DNA (882bp) protein (294aa)
Membrane protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JAF2_9SPHN rbh
Membrane protein {ECO:0000313|EMBL:EQB18874.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
hypothetical protein
scnpilot_p_inoc_scaffold_80_150
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175138..175878
DNA (741bp) protein (247aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6J3_NOVAD rbh
glutathione S-transferase-like protein
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABD26530.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
Displaying items 121-150 of 577 in total

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