ggKbase home page

scnpilot_p_inoc_scaffold_80_134

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(158042..158335)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=2 Tax=Novosphingobium RepID=F6IPG3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 96.0
  • Bit_score: 151
  • Evalue 4.40e-34
50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 96.0
  • Bit_score: 151
  • Evalue 1.20e-34
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=702113 sp similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 96.0
  • Bit_score: 151
  • Evalue 6.10e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGAGCAATACCCTGACCCTGCCGGCCGAGACGCGTGCGAAGACTGGCAAGGGAGCCAGCCGCACCTTGCGTCGTGAAGGCCGCGTGCCCGCCGTGATCTATGGTGGCAATGCCGAACCCATCGCGATCCACGTCGAAGCCAAGGAGCTGATCCGTCAGCTCAACACCGGCACTTTCTTCGACGGCGTGATCGAGCTGACCGTTGACGGCCAGACCATCAAGACCACCCCCAAGGACGTCGCCTTCCACCCGGTGAGCGACCGTCCCGAGCACGTGGACTTCCTGCGCGCTTAA
PROTEIN sequence
Length: 98
MSNTLTLPAETRAKTGKGASRTLRREGRVPAVIYGGNAEPIAIHVEAKELIRQLNTGTFFDGVIELTVDGQTIKTTPKDVAFHPVSDRPEHVDFLRA*