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scnpilot_p_inoc_scaffold_245

Search features with annotation key words

Displaying items 91-120 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_245_91
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107000..108529)
DNA (1530bp) protein (510aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GTP5_9SPHN rbh
scnpilot_p_inoc_scaffold_245_92
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108770..109618
DNA (849bp) protein (283aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Signal peptidase I, Serine peptidase, MEROPS family S26A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7C5_NOVAD
scnpilot_p_inoc_scaffold_245_93
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109615..110346
DNA (732bp) protein (244aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CAH6_9SPHN
ribonuclease III
scnpilot_p_inoc_scaffold_245_94
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110343..111257
DNA (915bp) protein (305aa)
GTPase Era n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHX0_9SPHN
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
GTPase Era
scnpilot_p_inoc_scaffold_245_95
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111458..113056
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7C9_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56557.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_p_inoc_scaffold_245_96
unknown

Not on your lists

113066..114703
DNA (1638bp) protein (546aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_245_97
unknown

Not on your lists

comp(114704..116092)
DNA (1389bp) protein (463aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_245_98
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116289..118916)
DNA (2628bp) protein (876aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=473781 species="Bacteria; Proteobact
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. LH128 RepID=J8VM77_9SPHN rbh
scnpilot_p_inoc_scaffold_245_99
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119219..120445)
DNA (1227bp) protein (409aa)
DNA processing protein DprA, putative n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZA61_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH41796.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
DNA processing protein DprA
scnpilot_p_inoc_scaffold_245_100
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120442..121059)
DNA (618bp) protein (206aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W228_9SPHN
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
acyl-phosphate glycerol-3-phosphate acyltransferase
scnpilot_p_inoc_scaffold_245_101
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121192..122007
DNA (816bp) protein (272aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=983920 species="Bacteria; Prote
glutamate racemase (EC:5.1.1.3)
glutamate racemase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B570D6 rbh
scnpilot_p_inoc_scaffold_245_102
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122168..123382
DNA (1215bp) protein (405aa)
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:000025
5-aminolevulinate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E909 rbh
scnpilot_p_inoc_scaffold_245_103
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123626..124483)
DNA (858bp) protein (286aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4Q053_9CAUL rbh
phosphate abc transporter, atpase subunit
scnpilot_p_inoc_scaffold_245_104
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124480..125328)
DNA (849bp) protein (283aa)
phosphate ABC transporter permease n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003799E3A rbh
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:GAO37901.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
phosphate ABC transporter inner membrane subunit PstA
scnpilot_p_inoc_scaffold_245_105
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125328..126266)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E14E4 rbh
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:ABQ67469.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingom
scnpilot_p_inoc_scaffold_245_106
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126263..127276)
DNA (1014bp) protein (338aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003120CC0 rbh
phosphate ABC transporter periplasmic phosphate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
scnpilot_p_inoc_scaffold_245_107
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127666..129180
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C8F37 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57769.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_p_inoc_scaffold_245_108
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

129180..129770
DNA (591bp) protein (197aa)
hypothetical protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RBG_16_Chloroflexi_52_11_curated
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13IX6_BURXL
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase family protein
scnpilot_p_inoc_scaffold_245_109
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129849..130631
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E516 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIZ80981.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
3-hydroxybutyrate dehydrogenase
scnpilot_p_inoc_scaffold_245_110
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130680..131462)
DNA (783bp) protein (261aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8SES8_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJU11329.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_245_111
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131504..131935)
DNA (432bp) protein (144aa)
ApaG n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7V2_9SPHN
magnesium transporter ApaG
ApaG {ECO:0000313|EMBL:EHJ62595.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativor
scnpilot_p_inoc_scaffold_245_112
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132091..132522
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002898EB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48044.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_p_inoc_scaffold_245_113
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132529..133125)
DNA (597bp) protein (199aa)
metZ; O-succinylhomoserine sulfhydrylase (EC:2.5.1.-)
Cystathionine gamma-synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJ95_9SPHN
Cystathionine gamma-synthase {ECO:0000313|EMBL:GAD48252.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_p_inoc_scaffold_245_114
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133766..135028
DNA (1263bp) protein (421aa)
Dolichyl-phosphate-mannose--protein O-mannosyl transferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q2D4_9SPHN
Dolichyl-phosphate-mannose--protein O-mannosyl transferase {ECO:0000313|EMBL:EJL34297.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_245_115
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135143..136285)
DNA (1143bp) protein (381aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Dolichol-phosphate mannosyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPU1_9SPHN rbh
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:EZP83788.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_p_inoc_scaffold_245_116
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136437..137495)
DNA (1059bp) protein (353aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HIW1_9SPHN rbh
scnpilot_p_inoc_scaffold_245_117
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137509..138135)
DNA (627bp) protein (209aa)
DNA repair protein RecO n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IQZ3_9SPHN
DNA repair protein RecO {ECO:0000313|EMBL:EQB12084.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
DNA recombination protein RecO
scnpilot_p_inoc_scaffold_245_118
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138237..139097
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CTT0_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU75639.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein; K14411 RNA-binding protein Musashi
scnpilot_p_inoc_scaffold_245_119
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139118..140377)
DNA (1260bp) protein (420aa)
Putative membrane protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2PGB6_9SPHN rbh
Putative membrane protein {ECO:0000313|EMBL:EJL26317.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
hypothetical protein
scnpilot_p_inoc_scaffold_245_120
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140406..141608)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEA4_9SPHN rbh
Scaffold11, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31538.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
Displaying items 91-120 of 172 in total

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