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scnpilot_p_inoc_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 172 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_245_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78..953)
DNA (876bp) protein (292aa)
antirepressor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CDC0D
antirestriction protein ArdC
Antirestriction protein ArdC {ECO:0000313|EMBL:AJA11375.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
scnpilot_p_inoc_scaffold_245_2
unknown

Not on your lists

1463..2338
DNA (876bp) protein (292aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_245_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2351..3139)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGS9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13473.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
scnpilot_p_inoc_scaffold_245_4
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3243..5006)
DNA (1764bp) protein (588aa)
UPI0003D68E96 related cluster n=1 Tax=unknown RepID=UPI0003D68E96 rbh
Chemotaxis protein {ECO:0000313|EMBL:ETI64275.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100
hypothetical protein
scnpilot_p_inoc_scaffold_245_5
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5003..6697)
DNA (1695bp) protein (565aa)
UPI0003D5ADE1 related cluster n=1 Tax=unknown RepID=UPI0003D5ADE1 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI64311.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_245_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7298..9052
DNA (1755bp) protein (585aa)
UPI0003CEFE0B related cluster n=1 Tax=unknown RepID=UPI0003CEFE0B rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD25689.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
scnpilot_p_inoc_scaffold_245_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9049..9678
DNA (630bp) protein (210aa)
UPI0003CEB5F9 related cluster n=1 Tax=unknown RepID=UPI0003CEB5F9
Uncharacterized protein {ECO:0000313|EMBL:KFD25690.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
scnpilot_p_inoc_scaffold_245_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9675..12107
DNA (2433bp) protein (811aa)
UPI0003CEEB63 related cluster n=1 Tax=unknown RepID=UPI0003CEEB63 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD25691.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoi
hypothetical protein
scnpilot_p_inoc_scaffold_245_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13095..14357
DNA (1263bp) protein (421aa)
transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C778 rbh
Transporter {ECO:0000313|EMBL:KEZ12088.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu
heavy metal efflux system protein
scnpilot_p_inoc_scaffold_245_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14361..15527
DNA (1167bp) protein (389aa)
hemolysin D n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036EAE24 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KEZ16604.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
czcB; metal ion efflux membrane fusion protein family
scnpilot_p_inoc_scaffold_245_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15532..18771
DNA (3240bp) protein (1080aa)
cation transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C77A rbh
Cation transporter {ECO:0000313|EMBL:KFD26961.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae
CzcA family heavy metal efflux pump
scnpilot_p_inoc_scaffold_245_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18842..19336
DNA (495bp) protein (165aa)
UPI0003D66734 related cluster n=1 Tax=unknown RepID=UPI0003D66734
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI58573.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_p_inoc_scaffold_245_13
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19426..20040
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000317DE79
Scaffold19, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30676.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_p_inoc_scaffold_245_14
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20066..20683
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C77E
Uncharacterized protein {ECO:0000313|EMBL:KFL44937.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_p_inoc_scaffold_245_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20680..23151
DNA (2472bp) protein (824aa)
Heavy metal translocating P-type ATPase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7D5_9SPHN rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AGH50424.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
heavy metal translocating P-type ATPase
scnpilot_p_inoc_scaffold_245_16
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23158..23841
DNA (684bp) protein (228aa)
Transporter n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJI6_9SPHN rbh
transporter
Transporter {ECO:0000313|EMBL:EHJ58513.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaro
scnpilot_p_inoc_scaffold_245_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24023..24874
DNA (852bp) protein (284aa)
membrane protein n=1 Tax=Alphaproteobacteria RepID=UPI000262C781 rbh
Membrane protein {ECO:0000313|EMBL:KFD26954.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (
membrane protein
scnpilot_p_inoc_scaffold_245_18
unknown

Not on your lists

24874..25977
DNA (1104bp) protein (368aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_245_19
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26226..26963
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E7AF4D
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEQ53292.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_245_20
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27049..27693
DNA (645bp) protein (215aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=1522072 species="B
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030E56B9
luxI; N-acyl-L-homoserine lactone synthetase
scnpilot_p_inoc_scaffold_245_21
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27705..28601
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EF4096 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEQ53294.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlor
hypothetical protein
scnpilot_p_inoc_scaffold_245_22
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28598..29209
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EE891F
Uncharacterized protein {ECO:0000313|EMBL:AHE55572.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_245_23
unknown

Not on your lists

29335..29475
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_245_24
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29541..30215
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMU4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55570.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_p_inoc_scaffold_245_25
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30215..31996
DNA (1782bp) protein (594aa)
asparagine synthase (EC:6.3.5.4)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNY3_SPHYA rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55569.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_p_inoc_scaffold_245_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32029..34155)
DNA (2127bp) protein (709aa)
Acylaminoacyl-peptidase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55568.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
putative peptidase
scnpilot_p_inoc_scaffold_245_27
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34188..36788)
DNA (2601bp) protein (867aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55567.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_245_28
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36855..37937)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7T9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55566.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
fecR; Fe2+-dicitrate sensor membrane component
scnpilot_p_inoc_scaffold_245_29
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37937..38515)
DNA (579bp) protein (193aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMT9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55565.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
ECF subfamily RNA polymerase sigma-24 factor
scnpilot_p_inoc_scaffold_245_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38913..40238)
DNA (1326bp) protein (442aa)
Serine/threonine-protein kinase HipA {ECO:0000313|EMBL:AKH43589.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AKH43589.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
toxin HipA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6904C rbh
toxin HipA
Displaying items 1-30 of 172 in total

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